Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00019 ATGACACTCTCCTTTATCTCACCACAACCCCAACACTCCCATTACCATTACCATCCTCCTATTAAATTTCACCATTCCTCACTCACCTCCTCTGCCACCACCCGGAGCAGGCCCCGCTGGCCTCGCATGGACCACCGCCGGAAAGACAAGGTGGTCGTCATCATGGGCGCCACTGGCTCCGGAAAATCGCGTCTTTCCATCGACCTCGCCACCCTCTTCCCTTTCACTGAAATCATCAACTCCGATAAAATGCAAGTCTACAGAGGCCTAGAAATCACCACCAACAAGATCCCCCTCCACCAACGCAACGGCGTCCCCCACCACCTTCTCGGCGACGTCGACCCTTCCCTCGGCGAGTTCTCCCCCTCTGACTTCCGCCGCCGCGCCGGCGACGTCATCTCCGACATCACCTGCCGGAGGAAGCTCCCCATCGTCGTTGGTGGCTCCAACTCCTTCGTTCACGCTCTTCTGGCGGAACGATTCGACCCTGAGTCAAACGTGTTCGACGACGAGTCATCGCCGCTAGCGATATCTTCCGAGTTAAGGTACAGGTGTTGCTTCCTCTGGATGGACATATCGTTCCCTGTGCTATCGGAATACTTGCTGAGACGAGTCGATGACATGCTTGACTCGGGAATGGTGGACGAGTTGGCTCAGTTCTTCGACCCGGACGCGGCGAACGGAACCGGGTTGAGAAAAGCCATCGGGGTGCCCGAGTTTGACCGGTTTTTTAAAGAGTATACACCGGGTGAGGATGATTCGGTGCGGGAGGGTGTATACGAGGAAGCAGTGAGGGCGATTAAAGACAACACGTGTCAGCTGGCGAAGAGACAGATAGGGAAGATCTTGCGGTTAAAACGAGCAGGTTGGGACCTACGGAGGATTGACGCCACGGAGGTGTTTCGGGCGGTGCTGACGTCAGGGTCTCACGGTGGGTCTGATATATGGAAGAGGCAAGTGTTGGAACCAAGCGTGAAGATTGTGAGGCGCTTCTTGATGGAGTAG 1005 0.5592 MTLSFISPQPQHSHYHYHPPIKFHHSSLTSSATTRSRPRWPRMDHRRKDKVVVIMGATGSGKSRLSIDLATLFPFTEIINSDKMQVYRGLEITTNKIPLHQRNGVPHHLLGDVDPSLGEFSPSDFRRRAGDVISDITCRRKLPIVVGGSNSFVHALLAERFDPESNVFDDESSPLAISSELRYRCCFLWMDISFPVLSEYLLRRVDDMLDSGMVDELAQFFDPDAANGTGLRKAIGVPEFDRFFKEYTPGEDDSVREGVYEEAVRAIKDNTCQLAKRQIGKILRLKRAGWDLRRIDATEVFRAVLTSGSHGGSDIWKRQVLEPSVKIVRRFLME 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00019 334 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 194 292 - -
Sebi26g00019 334 Pfam IPP transferase 178 279 - -
Sebi26g00019 334 Pfam IPP transferase 85 161 - -
Sebi26g00019 334 Gene3D - 48 332 IPR027417 -
Sebi26g00019 334 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 48 332 IPR039657 -
Sebi26g00019 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 224 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00019 Sebi-Chr26 264165 265169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00019 182 332 C2H2 Transcription Factor Family AT2G27760 32.022 1.08e-16 79.0