Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00015 ATGTCCACAATTACAAAGAGAGAATTGGGTTCCAATGAAGAAAGTGAGCTGAGAAGAGGTCCTTGGACTCTTGAAGAAGACAGCCTACTCATACACTATATTGCTCGTCATGGTGAAGGTCGTTGGAATATGTTAGCCAAAAGTGCAGGATTGAAGAGGACTGGAAAAAGCTGCAGACTTAGATGGCTGAATTACTTGAAGCCTGACATTAAAAGAGGGAACCTTACTCCACAGGAACAACTGTTGATCCTTGAACTCCATTCCAAGTGGGGTGGTCAAAAAATTGCTCAGCATCTGCCAGGAAGAACAGACAATGAGATTAAGAACTACTGGAGAACAAGGGTACAGAAACAGGCACGCCAACTTAACATTGAGTCTGGTAGCAAGAGATTCATTGATGCTGTTAAGTGTTTTTGGATGCCAAGATTGCTTCAAAAGATGGAACAGAACTCTTCCTTTACCTCTCACTCCTCCATGACACACATGAATTTTGGGAATTCTGCAGAATCTTCAACCAGTTCAATGTCAACCAGCTTCAATATTCCTTCTCTGTCTCCATCATCTCCTCCACAAATGGAATTTATAGATGCTGCAAACCACTTGAGCACTATGTCCAGCCCCAGCAATCCTTCCTCGGATTCCTTCCAATTTTCACAGCCACTTGAAATTCAACAACACCAAAATGGTCCTCCCAATGTGTTTGAGAATAATGTTTACAGCTATCCAATCCAGGACACCTGCTATGTTGATACCACTAATAACTATGGTTTGGAAGGTCTAAATCTGGATCCCCTGTCTTCAATGGAAACTTATGACATTTCACAGTTTGATTTTCAAACTGCTGGGAGTGGCTGGATGTTAGACAACATGGGTGATACTTTATGA 885 0.4192 MSTITKRELGSNEESELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGGQKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKRFIDAVKCFWMPRLLQKMEQNSSFTSHSSMTHMNFGNSAESSTSSMSTSFNIPSLSPSSPPQMEFIDAANHLSTMSSPSNPSSDSFQFSQPLEIQQHQNGPPNVFENNVYSYPIQDTCYVDTTNNYGLEGLNLDPLSSMETYDISQFDFQTAGSGWMLDNMGDTL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00015 294 FunFam Myb transcription factor 19 71 - -
Sebi26g00015 294 MobiDBLite consensus disorder prediction 164 192 - -
Sebi26g00015 294 SUPERFAMILY Homeodomain-like 17 111 IPR009057 -
Sebi26g00015 294 Gene3D - 16 72 - -
Sebi26g00015 294 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Sebi26g00015 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 119 IPR017930 -
Sebi26g00015 294 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 13 191 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sebi26g00015 294 CDD SANT 76 113 IPR001005 -
Sebi26g00015 294 SMART sant 18 68 IPR001005 -
Sebi26g00015 294 SMART sant 71 117 IPR001005 -
Sebi26g00015 294 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 34 43 IPR001345 GO:0003824
Sebi26g00015 294 ProSiteProfiles Myb-like domain profile. 67 115 IPR001005 -
Sebi26g00015 294 CDD SANT 21 66 IPR001005 -
Sebi26g00015 294 Gene3D - 75 118 - -
Sebi26g00015 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 70 IPR017930 -
Sebi26g00015 294 Pfam Myb-like DNA-binding domain 72 113 IPR001005 -
Sebi26g00015 294 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00015 Sebi-Chr26 175077 176162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00015 14 155 MYB Transcription Factor Family AT1G68320 80.556 1.97e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi26g00015 Myb_DNA-binding 3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00015 K09422 - gmx:100775834 469.544