Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00009 ATGGACTACAACACCAAAACAACAAACCCCACTTCCCCACCGCGCCTAAAGCTCTTTGGCTTCAGCGTCCATGAAGACTCCTTCTCCTTCCAAGAAAACGAGGTGCTGCTGCATGAAGACCTACCAGACTCAACCACAAAAGCCACCTCCACTTCCTCCTCCCCATCCGGTTCACCGGACTCCACCGGAGGCGGCGGAGGTGACTCTTTCCCTCCTTCCTCCGGTGACCGGAAATACGAGTGCCAGTACTGTTGCAGAGAATTTGCAAATTCACAAGCACTTGGTGGACACCAAAACGCCCACAAGAAAGAGCGTCAACAACTCAAGCGTGCACAGTTACAGGCCACACGAAACGCTGCCGTTTCGTTCGTGCGGAACCCTATCATCTCCGCCTTCGCCCCTCCGCCGCACCTGCTGGCTCCGCCGGGGTCCGTGATGGTCCCGGGAGCCCCGTCCTCATGGGTGTACGTGCCGCCACGTGCCGCGCCTCCTCCCTTCCACGTGTCAGTATCACACGGCTGTGCGTTCCCGTCGGCGAACTGCAACAACATGAGTAATAATAATATCACCACCATAACGGGTGCGAAATCAGCGGGTGTAGGGATGTTTCCTTATGTTGGCGTTGTAGGGGATTCGCCATCCGCATTGTCAACGATGCAGGTACAGGCCCGGGCCCACCACGCCAGAATGGATGGGCCCTCTTTGAGTAGGTTCTCAAAAGGGGACGGTGGGCCCAATTTTGATGATGTATTGGGCTTGGACTTGCATCTTAGTCTTGCGCCAGCTGCGCCGTGA 795 0.566 MDYNTKTTNPTSPPRLKLFGFSVHEDSFSFQENEVLLHEDLPDSTTKATSTSSSPSGSPDSTGGGGGDSFPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLAPPGSVMVPGAPSSWVYVPPRAAPPPFHVSVSHGCAFPSANCNNMSNNNITTITGAKSAGVGMFPYVGVVGDSPSALSTMQVQARAHHARMDGPSLSRFSKGDGGPNFDDVLGLDLHLSLAPAAP 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00009 264 Gene3D Classic Zinc Finger 69 126 - -
Sebi26g00009 264 MobiDBLite consensus disorder prediction 34 74 - -
Sebi26g00009 264 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Sebi26g00009 264 FunFam Zinc finger protein GIS3 67 129 - -
Sebi26g00009 264 MobiDBLite consensus disorder prediction 43 63 - -
Sebi26g00009 264 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Sebi26g00009 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Sebi26g00009 264 PANTHER ZINC FINGER PROTEIN 5 7 263 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00009 Sebi-Chr26 78985 79779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00009 1 262 C2H2 Transcription Factor Family AT1G68360 45.000 4.97e-55 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00009 - - gmx:102663095 381.719