Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi26g00005 ATGGGGAACCGAGGACCCGGACGAACCCCACTGGACTGGACCACCAGGCTTAAAATAGCAGCTGGAGCAGCACGAGGTGTGGCTTTTATTCACAACTCCTGCAAGTCCCTTAGGCTCACCCATGGTAACATCAAATCCACCAACATCCTCCTTGACAAGCAGGGGAATGCACGCCTCTCAGATTTTGGGCTTTCCATCTTTGCGGGCCCGGGCCCAGTGGGTGGGAGATCCAACGGCTACCGTGCTCCGGAGGCATCGGATGGTCGAAAACAATCCCAGAAGTCTGACGTGTACTCTTTTGGGGTTCTGCTGCTGGAGCTGCTCACGGGAAAGTGTCCCTCCGTGGTGGACAATGGTGGGGCAGTGGACCTACCAAGGTGGGTCCAGTCAGTGGTCAGAGAGGAATGGACGGCTGAGGTTTTTGATTTGGAGTTGATGAGATACAAGGATATTGAAGAGGAGATGGTGGGGCTGCTTCAGATAGCTATGTCTTGTACTGCGGCTGCACCTGATCAACGGCCTAGGATGAGCCACGTGGTCAAGATGATTGAGGAGTTGCGTGGGGTCGAAGTGTCTCCGTGTCATGACACGTTGGACTCGGTGTCTGAGTCACCTTCCTTGTCTGAAGATGCGTGTGGAACTAGTCAGTGA 651 0.5453 MGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSLRLTHGNIKSTNILLDKQGNARLSDFGLSIFAGPGPVGGRSNGYRAPEASDGRKQSQKSDVYSFGVLLLELLTGKCPSVVDNGGAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMSCTAAAPDQRPRMSHVVKMIEELRGVEVSPCHDTLDSVSESPSLSEDACGTSQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi26g00005 216 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 2 193 - -
Sebi26g00005 216 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 188 IPR046959 -
Sebi26g00005 216 SUPERFAMILY Protein kinase-like (PK-like) 9 183 IPR011009 -
Sebi26g00005 216 Gene3D Transferase(Phosphotransferase) domain 1 3 200 - -
Sebi26g00005 216 Pfam Protein kinase domain 18 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi26g00005 216 SMART tyrkin_6 1 183 IPR020635 GO:0004713|GO:0006468
Sebi26g00005 216 MobiDBLite consensus disorder prediction 194 216 - -
Sebi26g00005 216 MobiDBLite consensus disorder prediction 197 216 - -
Sebi26g00005 216 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi26g00005 Sebi-Chr26 22685 23380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi26g00005 2 216 Receptor kinase-like Gene Family AT1G68400 76.577 5.00e-118 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi26g00005 Pkinase 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi26g00005 - - vum:124834036 408.297