Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi269g00054 ATGGCATCCAGCTCAATGTCATCTTCTGGATCATGGAGTGTTAAGGACAATAAAGCCTTTGAAAGGGCTCTAGCTGTTTATGACAAGGACACCCCTGACCGTTGGTACAATGTTGCAAGGGCTGTTGGAGGGAAAACTCCAGAGGAAGTGAAGAGGCACTATGATCTCCTTGTCCAGGACATTAGGCACATTGAGTCAGGGCAAGTGCCATTCCCAAATTACAAGAAAAGTGAAGGTTATGATGAGGAGAAAAGGCTCAAAAACCTGAAGCTCCAGTGA 279 0.4588 MASSSMSSSGSWSVKDNKAFERALAVYDKDTPDRWYNVARAVGGKTPEEVKRHYDLLVQDIRHIESGQVPFPNYKKSEGYDEEKRLKNLKLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi269g00054 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Sebi269g00054 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Sebi269g00054 92 SMART sant 8 60 IPR001005 -
Sebi269g00054 92 ProSiteProfiles SANT domain profile. 7 54 IPR017884 -
Sebi269g00054 92 CDD SANT 18 54 IPR001005 -
Sebi269g00054 92 FunFam Transcription factor SRM1 4 71 - -
Sebi269g00054 92 SUPERFAMILY Homeodomain-like 4 61 IPR009057 -
Sebi269g00054 92 Gene3D - 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi269g00054 Sebi-Chr269 1131492 1132212 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi269g00054 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi269g00054 - - gmx:778061 154.451