Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi269g00024 ATGCACTTTTTCTTTCACAATCTTTTCTACTCAAAGCTCATCGCCATCACTAATGGATTTTCCCACGATACCTTCGTAGACAAAGGTAAACACAACAATGACTACAAAGCCACAATCGACAACAGAAAACCCATCGCCACTATCAAAGAAAAATGCCACGACAACGTTGTCGACAAAGAGATTGAGATCATCGAATGCGTCGCAAACCCTCAGTGCCTTGTCGATGTCATTAGCTTCTCCACCAACCCTTGTCGCCTTGTCAACGTCTTGTACTCAGGGAAAATCAAGGGTTGCTGCACCAGCTCCTCTATTCCTCTTCATCTCCCTCCTTCCTCTTTTACTCTTCTCTCACCCATTGCCCGAGGGGCTGAGAGTGTTGTTTATGAAGGGACTTTGGATGGTGAGAAGGTTGCGGTGAAGAAACCCATCTTGTCAGTTTCAGAAGACATTAATAAGTTCCATAAAGAATTGCAATTGCTATGCAAGCTAGATCACCGGGGAATAGCAACACTAATTGCTGCCCATGCAAAACCACCCAATTACTTGTTTTTCTTCAAGTTATATGAATCTTCGAATCTCGCACAGAAGTTACATGTGGAAGAATGGGCCCCAACTATCAATCATGCACTTATGATAACAATGCAGTTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTTTACATAGAGATGTGAAACCAGCGAATATTCTTCTTGACAAAAATCTTTGTCCGCACCTCACTGATTTTGGTTTGGCTGAATACAAGAATGATATTAAGGGAGTTTCTCTTCAGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTTCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAGGAGTTACACACAGAAAAATCAGATGTATACAGTTTTGGGGTATCAATCAATGAACTTCTTACTGGTGTTGTGCCATATACTGATCTTCGTGCAGAAGCACAGGCTCACACAGTGCTTGAGATGAACTATACTGAGCAGCAACTAACAGCGGCTGTTGTTTCTGATGGATTACGGCCAGTCCTTGCCAGTGAGGAATTGGGTATACCCTCAAGATTATTATCAATGATACAGAAGTGCTGGGATGCAAATCCTAAAAGCAGACCTTCCTTTGATGATATTGTCAAGGAACTTGATTTTATTATGGAACAGAGGAAGATAAAGATGGTAGAAGACGTGCAAATAAGACCTTGTAACTTGCATGTGGATCAACTTGTGGACAAGACTTACCTTCAGGCTTATCAAGAAAGTATTAGTTGGTCCACTCAAGGTGAACTTTTGGCCAGGAATGCCTCTAGTGCAACTGATTCTGGTTTGAGAACATGGTCTGAGTCTTATGATGAGCCTTTGGCTTACCATCCCATGCTGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGACACACATTTCCTTCTGCCCCATATTTGCAATGAAAAGGATGTCTATGCTTTTGGTATCTTTGATGGCCACAGAGGTGCAGCAGCTGCTGAGTTTTCCTCTAGAGCTGTACCAGCAGTTTTGCAAACTTTAGGTTTTACGAGCAGTCCTGCTAATGCACTAGTGGAAGCGTTCCTTAGGACAGATGCTGCCTTCAGAAAGGAGCTTGATTCTTTTCGCAAATCCAACAGATGTATCCAGAAGGATTGGCATCCTGGTTGTACAGCAATTACTGCTCTTGTAGTCAGGAACAAGCTATTTGTTGCTAACATTGGTGATTGCAGGGCAATCTTATGTCGTGCTGGTAATCCCATTGCTCTAAGTAAGGATCATGTTGCAAGCTGTCTTCAAGAGAGAGAGCGTGTCACTCGTCATGGGGGCCATGTACATTGGCAAGTTGATACCTGGAGAGTTGGTCTTCCTGCGCTTCAGGTGCAAACAGGGCATGAGGAAGTGCAACCTAGCCATGGGCCTAATTCTAGAAGGGGTAAGAAGGGAATTGCTCAGAGCAAAGGAGGTGAGGGCGCAAGGGCCATGGAGAGGGGAGTTACTCGTTCCATTGGTGATGACGATCTGAAGCCTGCTGTAACTGCAGAGCCTGAGATAACCGATACTACCTTATGTGAAGAGGATGAATTTCTGGTCATGGCTAGTGATGGCCTCTGGGATGTCATAAGCAGCATGGAGATCATAAATATAATAAAAGACACTGTTAAAGAGCCTGGAATGTGCTCTAAGAGGTTGGCTACTGAAGCAGTGGAACGTGGCAGCAAAGATAACATCACAGTTATTGTCGTTTTTTTACGTCCTGTATCTACAGCAGAGAGAATTTATTAG 2337 0.4352 MHFFFHNLFYSKLIAITNGFSHDTFVDKGKHNNDYKATIDNRKPIATIKEKCHDNVVDKEIEIIECVANPQCLVDVISFSTNPCRLVNVLYSGKIKGCCTSSSIPLHLPPSSFTLLSPIARGAESVVYEGTLDGEKVAVKKPILSVSEDINKFHKELQLLCKLDHRGIATLIAAHAKPPNYLFFFKLYESSNLAQKLHVEEWAPTINHALMITMQLAKALQYLHNLGILHRDVKPANILLDKNLCPHLTDFGLAEYKNDIKGVSLQNWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGVSINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLASEELGIPSRLLSMIQKCWDANPKSRPSFDDIVKELDFIMEQRKIKMVEDVQIRPCNLHVDQLVDKTYLQAYQESISWSTQGELLARNASSATDSGLRTWSESYDEPLAYHPMLSWGSYATCGRRETMEDTHFLLPHICNEKDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTLGFTSSPANALVEAFLRTDAAFRKELDSFRKSNRCIQKDWHPGCTAITALVVRNKLFVANIGDCRAILCRAGNPIALSKDHVASCLQERERVTRHGGHVHWQVDTWRVGLPALQVQTGHEEVQPSHGPNSRRGKKGIAQSKGGEGARAMERGVTRSIGDDDLKPAVTAEPEITDTTLCEEDEFLVMASDGLWDVISSMEIINIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi269g00024 778 CDD PP2Cc 475 768 IPR001932 -
Sebi269g00024 778 Gene3D - 466 773 IPR036457 -
Sebi269g00024 778 Pfam Protein phosphatase 2C 478 761 IPR001932 -
Sebi269g00024 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Sebi269g00024 778 ProSiteProfiles PPM-type phosphatase domain profile. 473 768 IPR001932 -
Sebi269g00024 778 ProSiteProfiles Protein kinase domain profile. 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi269g00024 778 FunFam Protein kinase and PP2C-like domain-containing protein 103 427 - -
Sebi269g00024 778 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 106 397 - -
Sebi269g00024 778 SUPERFAMILY Protein kinase-like (PK-like) 105 417 IPR011009 -
Sebi269g00024 778 SMART PP2C_4 463 766 IPR001932 -
Sebi269g00024 778 Pfam Protein kinase domain 115 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi269g00024 778 SMART PP2C_SIG_2 488 768 IPR001932 -
Sebi269g00024 778 SMART serkin_6 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi269g00024 778 SUPERFAMILY PP2C-like 465 770 IPR036457 -
Sebi269g00024 778 Gene3D Transferase(Phosphotransferase) domain 1 101 422 - -
Sebi269g00024 778 MobiDBLite consensus disorder prediction 647 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi269g00024 Sebi-Chr269 412046 423628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi269g00024 182 778 PP2C-type Phosphatase Gene Family AT2G40860 60.935 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Sebi269g00024 PP2C 6.8e-59 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi269g00024 - - vun:114166829 1122.84