Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi268g00028 ATGGTTTGGCACTTGACTGGTGCTTACTTCTCCCTTGCTGATGCTGTGGGGAGGACAGGACCTTCACCTACCACCATGAATTCTACTGTTTCTTCAAGAGGGAAGGTTGTGAAATTTGGAGCCCTGTTTACTTTTGATTCTGTCATTGGAAGATCAGCTAAACCTGCAATTCTGGCTGCCGTTGATGATGTCAATTCTAATACCAGCATCCTCCCTGGCATTGAACTCCAAGTTATTTTACATGATACAAATTGCAGTGGCTTTCTTGGAACAGTGGAAGCTCTACAGTTGATGGAGAATGATGTGGTAGCTGTTGTTGGTCCACAGTCATCTGGAACAGCTCATATCATCTCTCATGTTGTTAATGAACTCCATGTACCTCTTCTGTCATTTGGGGCAACTGACCCTACTCTATCTGCTCTGCAATACCCATATTTTATCCGCACTACTCAGAGTGATTATCATCAGATGTTTGCAATTGCAGACCTTGTTGAGTATTACAGATGGAGGGAGGTAATTGCCATTTATGTAGATGATGATAATGGAAGGAATGGAATTTCTGTATTGGGTGATGCCTTGTCAAAGAATCGTGCCAAGATTTCTTACAAGGCTGCCTTCCCTTCTGGAGCCACAGAAAGTTATATCAGTGACTTGTTAAATGAAGTAAACTTAATGGAATCAAGGGTCTATGTTCTGCATGTTAATCCTGATTCTGGTTTAGCAATCTTCTCTATTGCCAAGAAGCTACGAATGATGGGAAATGGCTATGTTTGGATTGCAACAGATTGGCTTCCTTCAGTGCTGGATTCATTAGAGCCAGGTGACACTGACACAATGAATCTTTTACAAGGGGTTGTGGCTTTTCGTAATCACATTCCTGATACTGATCTCAAAAAGAGTTTTATCTCCAGGTTGAAAAGCCTAAAAGACAAGGAGACTGCAAACTTCAACTCATATGCATTTTATGCATATGATTCTGTTTGGCTGGCAGCTCGTGCCCTTGATGCTTATCTTAATGAAGGTGGAAATATATCTTTCTCCAATGACCCTAGGTTGCAAGACACACAAGGAAGCATGTTGCATTTAGCATCACTTCGTACTTTTGTTGGTGGTCCACAGTTTCTCCAGACAATTTTGAGAATGAACTTCACTGGTCTGAGTGGTCAAATTCAGTTTGACATGGACAGAAATTTAATCCATCCTGCATATGATATTCTTAATGTTGGTGGTACTAAATTCCGTGGAATTGGTTATTGGTCTAATCACTCTGGTCTTTCAGTTATAGCTCCTGAAATTTTGTATATGAAAAATTCATCTAAAACCTCTTCAACGAGCAGTCAACAACTGCACAATATGACATGGCCTGGAGAGGCTAAAACTATACCAAGGGGATGGGTATTTCCCAACAATGGAAAGCCACTGCGTATAGCAGTCCCAAACCGAGTAAGCTACAAGGAGTTTGTAGCTAAAGACAACAAGCCCCCATGGGTACAAGGTTATTGCATTGATATCTTTGAATCAGCCTTAAAATTATTGCCTTATCCTGTCCCACGAGAATATATATTATATGGAAATGGTGAAAGGAATCCTAGCTACAATGAGCTCGTGGAACAGGTTGCACAAAATAACTTTGATGCAGCAGTTGGAGATGTTACAATTGTCACAAATAGGACAAGAATTGTGGATTTTACTCAACCTTTTATGCAATCAGGGCTTGTTATTGTTGTTCCTGTCAAGGAGGAGAAATCAAATCCTTGGTCTTTCCTTGAGCCATTCACTATGCAAATGTGGTGTGTCACTGGTGTTTTCTTTCTTTTTGTGGGAACTGTTGTGTGGATTCTTGAGCACAGGTTCAATCATGAGTTCCGAGGTCCACCAAGGAAACAACTTATAACAGTCTTTTGGTTCAGTTTGTCAACAATGTTTTTCTCACACAGAGAGAACACTGTGAGTACTCTTGGGCGTTTGGTGCTAATCATATGGCTTTTTGTGGTGTTAATTATCAATTCAAGCTACACAGCTAGCTTGACATCCATCCTCACTGTGCAGCAACTGTCCACACAAATTGAAGGAATTGACAGCTTGATATCAAGTACTCAACCGATTGGAATTCAAGATGGGTCATTTGCACGGAAGTATCTTATAGATGAACTTAATATAGCAGAATCTAGGATAGTTACTTTGAAAAACATGCAGGACTACATTGATGCCCTCCAGCGTGGCCCAAGAGGTGGAGGGGTTGCAGCAATTGTTGATGAGCTTCCTTATATTGAGATCTTGATGTCCAGCTCCAAATGTAAGTTCACAACTGTTGGAGAGGAGTTCACTAAAAGTGGCTGGGGATTTGCATTCCAGAGGGACTCTCCCCTTGCTGTTGACTTGTCAACTGCTGTTCTTCGGCTCTCTGAGAATGGGGACATGCAAACGATTCATGACAAATGGCTTAATATAAAGGGGTGTGCAACCAATGATATTGATGCAAACAAACTATCTCTTACAAGCTTCTGGGGCCTCTTTCTTATATGTGGCATTACATGTGTCCTTGCCCTGATCATATTCTTTGCTAGAGTGTTCTGTCAATATAACAAGTTCAACCTACAGCCTAATGAGGTTGATGTGGAAATTCAACCAGTCAGGTCCAGAAGGACAAGCAGAACTGCTAGCTTCAAGCACTTGATTGATTTTGTAGATAAAAGGGAAGCAGAAATCAAAGATATACTTAGGCAGAATAAAAAAAGGAGACACAACCAAAGCTTAGACTTGCAATCCAATTCACCAAGCTAA 2784 0.4095 MVWHLTGAYFSLADAVGRTGPSPTTMNSTVSSRGKVVKFGALFTFDSVIGRSAKPAILAAVDDVNSNTSILPGIELQVILHDTNCSGFLGTVEALQLMENDVVAVVGPQSSGTAHIISHVVNELHVPLLSFGATDPTLSALQYPYFIRTTQSDYHQMFAIADLVEYYRWREVIAIYVDDDNGRNGISVLGDALSKNRAKISYKAAFPSGATESYISDLLNEVNLMESRVYVLHVNPDSGLAIFSIAKKLRMMGNGYVWIATDWLPSVLDSLEPGDTDTMNLLQGVVAFRNHIPDTDLKKSFISRLKSLKDKETANFNSYAFYAYDSVWLAARALDAYLNEGGNISFSNDPRLQDTQGSMLHLASLRTFVGGPQFLQTILRMNFTGLSGQIQFDMDRNLIHPAYDILNVGGTKFRGIGYWSNHSGLSVIAPEILYMKNSSKTSSTSSQQLHNMTWPGEAKTIPRGWVFPNNGKPLRIAVPNRVSYKEFVAKDNKPPWVQGYCIDIFESALKLLPYPVPREYILYGNGERNPSYNELVEQVAQNNFDAAVGDVTIVTNRTRIVDFTQPFMQSGLVIVVPVKEEKSNPWSFLEPFTMQMWCVTGVFFLFVGTVVWILEHRFNHEFRGPPRKQLITVFWFSLSTMFFSHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSTQIEGIDSLISSTQPIGIQDGSFARKYLIDELNIAESRIVTLKNMQDYIDALQRGPRGGGVAAIVDELPYIEILMSSSKCKFTTVGEEFTKSGWGFAFQRDSPLAVDLSTAVLRLSENGDMQTIHDKWLNIKGCATNDIDANKLSLTSFWGLFLICGITCVLALIIFFARVFCQYNKFNLQPNEVDVEIQPVRSRRTSRTASFKHLIDFVDKREAEIKDILRQNKKRRHNQSLDLQSNSPS 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi268g00028 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 50 66 - -
Sebi268g00028 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 110 138 - -
Sebi268g00028 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 241 264 - -
Sebi268g00028 927 Pfam Bacterial extracellular solute-binding proteins, family 3 529 816 IPR001638 -
Sebi268g00028 927 FunFam Glutamate receptor 152 312 - -
Sebi268g00028 927 Pfam Ligand-gated ion channel 817 845 IPR001320 GO:0015276|GO:0016020
Sebi268g00028 927 FunFam Glutamate receptor 711 819 - -
Sebi268g00028 927 CDD GluR_Plant 472 815 - -
Sebi268g00028 927 CDD PBP1_GABAb_receptor_plant 38 427 IPR044440 -
Sebi268g00028 927 Gene3D - 585 706 - -
Sebi268g00028 927 SUPERFAMILY Periplasmic binding protein-like II 453 815 - -
Sebi268g00028 927 SMART GluR_14 475 817 IPR001320 GO:0015276|GO:0016020
Sebi268g00028 927 SUPERFAMILY Periplasmic binding protein-like I 32 466 IPR028082 -
Sebi268g00028 927 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 889 IPR015683 -
Sebi268g00028 927 Pfam Receptor family ligand binding region 54 409 IPR001828 -
Sebi268g00028 927 Gene3D - 469 584 - -
Sebi268g00028 927 PIRSF IGluLR_plant 20 926 IPR017103 -
Sebi268g00028 927 FunFam Glutamate receptor 585 715 - -
Sebi268g00028 927 Gene3D - 56 400 - -
Sebi268g00028 927 Gene3D - 152 425 - -
Sebi268g00028 927 Gene3D - 707 818 - -
Sebi268g00028 927 FunFam Glutamate receptor 469 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi268g00028 Sebi-Chr268 527165 532423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi268g00028 33 782 Ion Channels AT1G05200 67.467 0.0 1084
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi268g00028 K05387 - gmx:100802782 1501.49