Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi266g00015 ATGGACCATCTTACACCAAACTATAAGACAACAAAGGTGATAAGAATGTTGCTCGAAATGGACCAGTCAAAGGTAATCCATCTGATTGAATCTCCTGAGGACTTGAAGATGAAGGTGTCTGAGAAAATGCAAGTCCTTCATGAAGCTGCATCAGGTTCTGAAGCTGGCGATCAGCTTGGCTCATTGTCATTGAATGAATGA 201 0.4179 MDHLTPNYKTTKVIRMLLEMDQSKVIHLIESPEDLKMKVSEKMQVLHEAASGSEAGDQLGSLSLNE 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi266g00015 66 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 1 51 IPR002004 GO:0003723
Sebi266g00015 66 SUPERFAMILY PABC (PABP) domain 10 57 IPR036053 GO:0003723
Sebi266g00015 66 SMART poly_2 2 49 IPR002004 GO:0003723
Sebi266g00015 66 Gene3D - 2 61 - -
Sebi266g00015 66 Pfam Poly-adenylate binding protein, unique domain 9 46 IPR002004 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi266g00015 Sebi-Chr266 434548 434748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi266g00015 10 66 Eukaryotic Initiation Factors Gene Family AT1G49760 55.932 3.40e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi266g00015 K13126 - gmx:100783163 90.8929