Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi266g00009 ATGGGAACGGAGAGTTACACATACATGGGACGCAGTTTCAGCGAACTGAGCATCAACGACGAATCCTCTTCTTCCGCTTTCAGCGACTGCAACAGTGACAGATCTGGCGAATTCGTCACCGCTTCTTCCCAATCACGACGCCTCCTCATCGCTTGCGCTTCCGAGAATTCCGACGATTTCATCCGTCAACTCGTTTCCGATCTCCACTCATCTTCAATCGACGAACAAAAACAAGCCGCTCTGGAAATCCGATTACTCGCCAAGAACAAACCGGAAAATCGCATCAAAATCGCCAAAGCCGGCGCAATCAAACCCTTAGTTTCCCTCATTTCTTCGCAAGACCTCCAACTTCAAGAATACGGCGTCACCGCGATTTTGAACCTCTCCCTGTGCGATGAGAACAAAGAGCTCATAGCTTCTTCGGGAGCGATTAAGCCTCTGGTTCGGGCGCTAAACACGGGAACCGCGACGGCGAAGGAGAACGCGGCGTGCGCACTGCTTCGCCTCTCGCAGGTGGAAGAGAGCAAGGCAGCGATCGGGAGGTCCGGCGCGATTCCTCTGCTGGTGAACCTTCTAGAAACCGGCGGCTTCCGCGGGAAGAAGGACGCGTCGACGACGCTGTACTCGCTCTGCAGTGTGAAAGAGAACAAGATGAGAGCGGTGAAGGCGGGAATCATGAAGGTGCTGGTTGAATTGATGGCGGATTTCGAATCGAACATGGTGGACAAATCGGCTTATGTAAGACAGAAAGAAATCGCGGTGGTTATTCTATTACAGCTGTGTGAGGATAGCGTGACTTATCGAACCATGGTGGCTCGCGAAGGTGCGATTCCTCCTTTGGTTGCTTTGACTCAATCCGGCACTAATCGCGCCAAGCAAAAGGTATTCCAATTCAGTTCAACACCACTACCACCACTTGAGGTCGTGACGTGGCACGGTGTTGGTTCTTCAAAACATTTTGCAGAACTTCTAATGCCACGTCAGTATCCTTGCAGAGCAGAGAAACTAATTGAGCTTCTGCGGCAACCAAGATCCGGCAACGTCGCTGCACGCACGTCAGAAGTGGTAGCATAA 1074 0.5186 MGTESYTYMGRSFSELSINDESSSSAFSDCNSDRSGEFVTASSQSRRLLIACASENSDDFIRQLVSDLHSSSIDEQKQAALEIRLLAKNKPENRIKIAKAGAIKPLVSLISSQDLQLQEYGVTAILNLSLCDENKELIASSGAIKPLVRALNTGTATAKENAACALLRLSQVEESKAAIGRSGAIPLLVNLLETGGFRGKKDASTTLYSLCSVKENKMRAVKAGIMKVLVELMADFESNMVDKSAYVRQKEIAVVILLQLCEDSVTYRTMVAREGAIPPLVALTQSGTNRAKQKVFQFSSTPLPPLEVVTWHGVGSSKHFAELLMPRQYPCRAEKLIELLRQPRSGNVAARTSEVVA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi266g00009 357 PANTHER U BOX DOMAIN-CONTAINING 248 295 - -
Sebi266g00009 357 Gene3D - 38 242 IPR011989 -
Sebi266g00009 357 FunFam ARM repeat superfamily protein 53 198 - -
Sebi266g00009 357 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 101 143 IPR000225 GO:0005515
Sebi266g00009 357 Pfam Armadillo/beta-catenin-like repeat 91 129 IPR000225 GO:0005515
Sebi266g00009 357 Pfam Armadillo/beta-catenin-like repeat 132 170 IPR000225 GO:0005515
Sebi266g00009 357 Pfam Armadillo/beta-catenin-like repeat 174 212 IPR000225 GO:0005515
Sebi266g00009 357 Gene3D - 243 300 IPR011989 -
Sebi266g00009 357 SMART arm_5 213 262 IPR000225 GO:0005515
Sebi266g00009 357 SMART arm_5 90 130 IPR000225 GO:0005515
Sebi266g00009 357 SMART arm_5 131 171 IPR000225 GO:0005515
Sebi266g00009 357 SMART arm_5 172 212 IPR000225 GO:0005515
Sebi266g00009 357 SUPERFAMILY ARM repeat 57 295 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi266g00009 Sebi-Chr266 223982 225440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi266g00009 25 294 U-box Gene Family AT2G23140 42.628 7.33e-61 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi266g00009 - - csav:115713735 468.774