Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi265g00028 ATGGAAAATATCTCTCAACCGAAAGCTCCAAAAGGAGGGAAACCGATAACGGCTTATCCTTTGTTAGAAACTTGGAAGCTCTTCCTTCTTTCTCTTTATCTCATTTCTTCAATGGCATTCTCTCTGCTAAGCCACTCTTTGGAAAATGAACTGAAAATTGAAGATTCAGAAGAGTTCCCTTTCATTGAAATTGGAAATGAAGGTCTCACAAAACGGATTCTCAGAAAAGGAGTCACTTGGCAAACTCCATTCTCTGGAGACGAAGTAGAAGGTGAGGTTATCAAAGGTTGGGATGAAGGAGTTGCCACCATGAAGAAAAGGGAGAGAGCAATCTTCAAAATACCACCTAACTTAGCATATGGGGCAGTAGGTTCTCCACCATTGATTCCTCCCAATGCAACTCTCATTTTTGAGATTGAAATGCTTTCTTGGAGTGCCATCAGGGACTTAACTGGTGATGGAGGAATCATGAAAAAGATAATACAAGAGGGAGAAGGATGGGCTACTCCTAGAGAGGCTGATGAGGTCCTAGTGAAATATGAAGCAAGGCTAGAGAATGGGATGCTTGTTAAGTCTGATACAGGTGTGGAGTTTAATGTAAGTGAGGGCTATCTTTGTCCTGCAATGAGTATAGCAGTAAAGACGATGAGAAAGGGTGAGGTGGCAGAGCTAGCTATGAAATTATGTTATGGGCTTAGTCAGAATTCAAATAGAACCACTGAGCTTGATGGTTTACCAGATTCTAATTTAACTACAATCAAACTTGAGCTGATGTCATGGAATGTTGTTACTGATGTCTCAGGAGATAAGAAGATACTGAAAAAGATTAAGAAAGTTGGTGAGGGATTTGATCGTCCAAATGAAGGATCCCAAGTGAAAGTGATATATTTGTGTAAAAGAGAAGATGGTGCAATTATTGAGAGAAAAGGGTCAAAGGAAGAACCTTTTGAATTCACAACTCAGGAAGAACAGGTACCTGAGGGTCTAGAAAGAGCAATAATGACAATGAAAAAAGCAGAACAAGCTCTGGTGACTATCAATTCTGAATATTTGTGTGACCAAAATAATTTACAAGGAAACGCGGCCAATGATAAAGTCCTTTATTATGAAGTTGAAATGGTTGATTTCATTAAGGAGAAGCCATTTTGGAAAATGGACACTCAAGAGAAAATAGAAGCTTGTGAGAGGAAGAAGCATGATGGAAATCTACTGTTCAAGGCTGAAAATTTCAGGCGTGCATCCAATAAATATGAAAAGGCTGTAAAATACATTGAGTTTGATCACTCATTCAGTGATGATGAGAAGCGCCATGCTAATTCCTTACGATTATCCTGTAATTTGAACAAAGCTGCTTGTAAACTTAAATTGGGGGAGTACACTGAAGTTGTCAGACTATGCACAAAGGTATTAGAACAAGACCCTTTAAATGTCAAGGCTCTATACAGAAGATGCCAAGCATACCTGAAAACATCAGACTTAGAGAAAGCTGAGGCTGACATTAAAAGAGCTCTGATTATTGATCCAAATAACAGAGACATTAAACTTGAGTACAAAGAGCTGAAACTTAAGCAAAAGGAATACAGTAGATATGAAGCTGACATCTTCAGCACAATGCTTTCAAGGATGAGCTAA 1632 0.3879 MENISQPKAPKGGKPITAYPLLETWKLFLLSLYLISSMAFSLLSHSLENELKIEDSEEFPFIEIGNEGLTKRILRKGVTWQTPFSGDEVEGEVIKGWDEGVATMKKRERAIFKIPPNLAYGAVGSPPLIPPNATLIFEIEMLSWSAIRDLTGDGGIMKKIIQEGEGWATPREADEVLVKYEARLENGMLVKSDTGVEFNVSEGYLCPAMSIAVKTMRKGEVAELAMKLCYGLSQNSNRTTELDGLPDSNLTTIKLELMSWNVVTDVSGDKKILKKIKKVGEGFDRPNEGSQVKVIYLCKREDGAIIERKGSKEEPFEFTTQEEQVPEGLERAIMTMKKAEQALVTINSEYLCDQNNLQGNAANDKVLYYEVEMVDFIKEKPFWKMDTQEKIEACERKKHDGNLLFKAENFRRASNKYEKAVKYIEFDHSFSDDEKRHANSLRLSCNLNKAACKLKLGEYTEVVRLCTKVLEQDPLNVKALYRRCQAYLKTSDLEKAEADIKRALIIDPNNRDIKLEYKELKLKQKEYSRYEADIFSTMLSRMS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi265g00028 543 ProSiteProfiles TPR repeat profile. 477 510 IPR019734 GO:0005515
Sebi265g00028 543 PANTHER PEPTIDYLPROLYL ISOMERASE 147 249 - -
Sebi265g00028 543 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 90 145 IPR001179 GO:0003755
Sebi265g00028 543 SUPERFAMILY FKBP-like 64 145 - -
Sebi265g00028 543 SMART tpr_5 443 476 IPR019734 GO:0005515
Sebi265g00028 543 SMART tpr_5 394 427 IPR019734 GO:0005515
Sebi265g00028 543 SMART tpr_5 477 510 IPR019734 GO:0005515
Sebi265g00028 543 SUPERFAMILY TPR-like 384 538 IPR011990 GO:0005515
Sebi265g00028 543 Gene3D Tetratricopeptide repeat domain 380 537 IPR011990 GO:0005515
Sebi265g00028 543 Gene3D - 89 146 IPR046357 GO:0003755
Sebi265g00028 543 SUPERFAMILY FKBP-like 150 231 - -
Sebi265g00028 543 FunFam Peptidylprolyl isomerase 382 537 - -
Sebi265g00028 543 Pfam Tetratricopeptide repeat 477 510 IPR001440 GO:0005515
Sebi265g00028 543 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 377 IPR001179 GO:0003755
Sebi265g00028 543 SUPERFAMILY FKBP-like 264 396 - -
Sebi265g00028 543 Gene3D - 262 379 IPR046357 GO:0003755
Sebi265g00028 543 Coils Coil 329 349 - -
Sebi265g00028 543 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 285 373 IPR001179 GO:0003755
Sebi265g00028 543 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 169 233 IPR001179 GO:0003755
Sebi265g00028 543 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 88 142 IPR001179 GO:0003755
Sebi265g00028 543 Gene3D - 147 261 IPR046357 GO:0003755
Sebi265g00028 543 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 173 261 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi265g00028 Sebi-Chr265 956950 962077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi265g00028 62 542 Calmodulin-binding Proteins AT5G48570 50.385 1.73e-175 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi265g00028 - - gmx:100785412 844.728