Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi265g00021 ATGTTAAACACATTGTTCACAAACAAGCAACATCCGAACAAAGGAAAGGGGAAAGTGGGTGAAGAATCAGAATCCAATCTAGACATGAGGAAGGAAATGATGGAGCAAGACCCCATAATGGAAAATCAAAATATTGAGAATGGGGTGTTAATGGATGAAGAGGAAGAGCCTAAACAAAACCAGGACAAGCAGAAGGTGATCATATTGGGAGAATCTAATGCAAGAAATCAAAAGGCTGCTTACTCTTGTGGTTTTTGTAACAAAAGCTTTGTTACTCCACAAGCATTAGGTGGCCACCAAAATGGCCACAAATGGGAGAGAAATCTCAAACAAGGAATCCAGGCTATAATATAG 354 0.3955 MLNTLFTNKQHPNKGKGKVGEESESNLDMRKEMMEQDPIMENQNIENGVLMDEEEEPKQNQDKQKVIILGESNARNQKAAYSCGFCNKSFVTPQALGGHQNGHKWERNLKQGIQAII 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi265g00021 117 MobiDBLite consensus disorder prediction 1 63 - -
Sebi265g00021 117 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Sebi265g00021 117 Coils Coil 109 117 - -
Sebi265g00021 117 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 18 111 IPR044246 GO:0009788
Sebi265g00021 117 MobiDBLite consensus disorder prediction 14 37 - -
Sebi265g00021 117 SUPERFAMILY beta-beta-alpha zinc fingers 78 109 IPR036236 -
Sebi265g00021 117 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Sebi265g00021 117 Gene3D Classic Zinc Finger 57 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi265g00021 Sebi-Chr265 718588 719057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi265g00021 55 109 C2H2 Transcription Factor Family AT5G01860 48.276 4.45e-11 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi265g00021 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi265g00021 - - lang:109329350 85.8853