Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi265g00018 ATGTCCGATAGAATATCCATTGGAGATGTTGAGGACAGAAAGCTGAAGCGCAGGATGGAGGAACCACCTGCCATGGACGAGGATTTGGAAGAGTTACTGACTCTCAGGCTTGGCAGTAACAGTTCCAAATCCTTGAAAATCTCTGAGGAGTCTGGTTCTGGAGTAGGTTCTGGAGAAGGAAATACTTCTCCAAAACCTGTCCAGCCCCTTACTCCCAGGGACCACCATGAGCAGGAAGTCCAAGCTGTAGAGCCGCAATACTCCTGCAAGTATTGCAACAAGAAGTTCACCAGTACTCAAGCTTTGGGTGGACACCAGAACGCTCATAGGCGTGAGCGTGTCATCACAAAAAAACTGGAGAATGATAAGTTTGAGTTGGGGGGCATGTATCGATATGGTAGATCTAATTCTAATATGTATCCCTATTCAATATCCATGGGAAATAATGCTCTCCAGTTGGGGGCGTCATCCTCCCTTTATCATGGTTCACAATTTAACTCCATTGGTCATGTCTCTAGCCCTAGCATGACTTGGACCAATGGATCTGCTGTCCTTCAGGGTGGTCATGGTGATCATGGAGGCCTTGAGGGAAATCCCAATGTGATTTCATTTAACAATGCATCCTCTGATGAGGAGATTGACTTGGAACTAAAACTTTAA 660 0.4576 MSDRISIGDVEDRKLKRRMEEPPAMDEDLEELLTLRLGSNSSKSLKISEESGSGVGSGEGNTSPKPVQPLTPRDHHEQEVQAVEPQYSCKYCNKKFTSTQALGGHQNAHRRERVITKKLENDKFELGGMYRYGRSNSNMYPYSISMGNNALQLGASSSLYHGSQFNSIGHVSSPSMTWTNGSAVLQGGHGDHGGLEGNPNVISFNNASSDEEIDLELKL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi265g00018 219 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Sebi265g00018 219 Gene3D Classic Zinc Finger 72 130 - -
Sebi265g00018 219 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Sebi265g00018 219 MobiDBLite consensus disorder prediction 1 33 - -
Sebi265g00018 219 SUPERFAMILY beta-beta-alpha zinc fingers 85 115 IPR036236 -
Sebi265g00018 219 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 74 178 IPR044246 GO:0009788
Sebi265g00018 219 MobiDBLite consensus disorder prediction 1 77 - -
Sebi265g00018 219 Pfam C2H2-type zinc finger 87 112 - -
Sebi265g00018 219 MobiDBLite consensus disorder prediction 35 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi265g00018 Sebi-Chr265 606508 607434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi265g00018 81 219 C2H2 Transcription Factor Family AT1G80730 31.361 9.76e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi265g00018 zf-C2H2_6 3.4e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi265g00018 - - cam:101490368 105.531