Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi264g00032 ATGGTAAGTGATTGTCGTTTTTGCTTCTGTCTCCACGCCGCAAATCCCATACCTTTTTCCGGTAACAGATCCGAACCCGTAAAACTTCTGACCCGAAACCGTGCGGGTTCACTCAGGGTGAGAGCTTCGGTTAGTGATGACGTTTTTGTAACTTCCCGGTGCCAATTGAGCTTCTACGAGCTTCTGGGTGTACCCGAATCCGGGTCATCGGTGGAGGTGAAACACGCGTACAAGCAGTTGGCCCGGAAGTACCACCCGGATGTGTCGCCACCGGGTCGGGTCGAGGAGTACACGAAGAGGTTTATTATGGTGCAGGAGGCCTACGAGACTTTGTCTGATCCAGCAAGGAGAGCTATGTATGATAGAGACATGGCTAATGGTAATGGGATTCACCTTGCCTTCTCCTCTTGCAGACGCTATAACTACCGTAGTGTTGATGATCAGGTGATTGAACAAAAAAATGAATGGAAAACTCAATGGCAATCTCAACTGTGGGAGCTGAAGAGAAGAAGTAAGTGTAAGGAAGGGAATATGTCTTGGGCAGCTCGAATGCGTCAGCAGATGGATGGATTAGCAAATAAATTATGA 588 0.483 MVSDCRFCFCLHAANPIPFSGNRSEPVKLLTRNRAGSLRVRASVSDDVFVTSRCQLSFYELLGVPESGSSVEVKHAYKQLARKYHPDVSPPGRVEEYTKRFIMVQEAYETLSDPARRAMYDRDMANGNGIHLAFSSCRRYNYRSVDDQVIEQKNEWKTQWQSQLWELKRRSKCKEGNMSWAARMRQQMDGLANKL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi264g00032 195 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 43 188 - -
Sebi264g00032 195 CDD DnaJ 58 113 IPR001623 -
Sebi264g00032 195 ProSiteProfiles dnaJ domain profile. 57 124 IPR001623 -
Sebi264g00032 195 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Sebi264g00032 195 SMART dnaj_3 56 116 IPR001623 -
Sebi264g00032 195 SUPERFAMILY Chaperone J-domain 56 131 IPR036869 -
Sebi264g00032 195 FunFam Chaperone protein dnaJ 20, chloroplastic 43 158 - -
Sebi264g00032 195 Gene3D DnaJ domain 55 178 IPR036869 -
Sebi264g00032 195 PRINTS DnaJ domain signature 77 92 IPR001623 -
Sebi264g00032 195 PRINTS DnaJ domain signature 59 77 IPR001623 -
Sebi264g00032 195 PRINTS DnaJ domain signature 96 116 IPR001623 -
Sebi264g00032 195 Pfam DnaJ domain 58 121 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi264g00032 Sebi-Chr264 1015287 1018612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi264g00032 53 121 C2H2 Transcription Factor Family AT1G74250 41.667 7.85e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi264g00032 - - gmx:100101903 211.075