Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi264g00025 ATGTCAGCGTGGGAGAAGGAAGAAGAAGCAGAAGAGGCACATGCACAAGTTGATATCTGGAACATCATATGTGGATTTGCGGAAATGGCAGTGACGAGATGTTCCATTGAGCTTGGCATAGCTGAAGCCATTGAAAAGCACGGAAGCCCCATGACACTATTGGATCTATCGTCAACCCTTGGATGTGATCCTTCATATCTTAACCGCATCATGAGATATATGGCAGTATGCTGCGGAAATCTTGATCATAGCAACCTCTTCAATGAAGCTATGGCATGTGATACTAAGTTTGTTGTGCCTGCTATTATTGAAGGTTGTAGTGAAGCATTTGATGGTGTTAGCACCTTGGTGGATGTTGGTGGAGGAAATGGCACCACCTCTCGCATCCTAGCAAAGGCTTGCCCTTGGATTCAATTGATCAATTTTGATCTTCCTCATGTTATTGTTGCAGCCCCAAAGTGCAATGGGGTGGAATATGTAGCAGGTGACATGTTTCAAAGTGTCCCCAAAGCTGATGCTGCATTTCTTTAA 531 0.4426 MSAWEKEEEAEEAHAQVDIWNIICGFAEMAVTRCSIELGIAEAIEKHGSPMTLLDLSSTLGCDPSYLNRIMRYMAVCCGNLDHSNLFNEAMACDTKFVVPAIIEGCSEAFDGVSTLVDVGGGNGTTSRILAKACPWIQLINFDLPHVIVAAPKCNGVEYVAGDMFQSVPKADAAFL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi264g00025 176 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 176 IPR016461 GO:0008168
Sebi264g00025 176 Pfam O-methyltransferase domain 84 176 IPR001077 GO:0008171
Sebi264g00025 176 Gene3D - 2 77 IPR036388 -
Sebi264g00025 176 Pfam Dimerisation domain 33 75 IPR012967 GO:0046983
Sebi264g00025 176 Gene3D Vaccinia Virus protein VP39 84 176 IPR029063 -
Sebi264g00025 176 PANTHER O-METHYLTRANSFERASE 83 174 IPR016461 GO:0008168
Sebi264g00025 176 SUPERFAMILY "Winged helix" DNA-binding domain 9 76 IPR036390 -
Sebi264g00025 176 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 176 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi264g00025 Sebi-Chr264 872276 873031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi264g00025 84 176 Monolignol Biosynthesis Gene Families AT5G54160 45.161 1.86e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi264g00025 K22588 - qsa:O6P43_022005 208.764