Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi264g00009 ATGGAAAATAATAATGAAAATGTTGATGAGAATGTCGTTGGGTTGGAAGATATTGTAAGTGAAGATGAAGTTGACACTGCAAGTGATTATGATCCTGATCAATTTGTCTTCGTTGTGGATTCGGAGGCTGATTTTGTGAAATTAAACCAAGAAATGTTATGTGTGGAAAATGTTAGTAAATTTAATTTTCCAAATTTGGAGGTTGCTTATGACTTTTATAATTGGTATGGGAAGAAGACTGGATTTTCTGCACGGAAGAGCAAAGTCCGTAAGAATGCAATGGGTGAAATTTATGAGAAGACATACCTTTGCCACAGGGAAGGAAAGCGACCAAATAACATGAAACCAGAAAAGGGGAAGAAAAAACGTCCAGCCAAGCCGGAGACAAGGTGTTCTTGCCCTGCAAAAATGAAGGTTCGGCTCGATGGACCATCTGGCCGTTGGAACGTGTCTAAGTTCTGTGATGCGCATAACCATGATATGCTACCCCCCAAATATGAAGGGATGCTGCCTGCTCATAGGAAAATGAGTGTAGCTGACATCTTGGAGATGAATAACATGCGAGATGCCGGTATTAGTACACCACAGATTTATGGGTCATTTGCTAGTCAATCTGGAGGTTACAATAATGTTGGCTTTCGTAAAAGAGATCTTTACAATGAGATTGGTAGGCAAAGAATGTTGCAGTTGAGTGATGTAAAGGGTGCTATTAAGTATTTACGTGAAAGGGAGGTCAATGAAGGGTCTATGTTTTGGAGGTACACGACTGATTGTGAAGCTGATGGTGGCAATGAAAGGCAAGATGCCTTCAGCAGAGTGATAACAGATGGTGACCTTGCTATGCGGAATGCCATCAAAAGAGTTTTACCCAATGCTCACCATAGGCTTTGTGCATGGCACCTGTGTCGTAATGCAGCCAGTAATGTTAAGAATCCTAAGATGGTTTCCATGTTTAGGAAATGTATGTTGGGTGATTATGAGGTTTACGAGTTTAAACATAGGTGGGAGGTAATGGTGAAGGAATTTAGACTGGAGGATAACAATTGGGTGAAGGAAATGTATGACAAGAAGAGGATGTGGGCTACAGGTTATATAAGGGGGAAATTCTTTGAAGGGTTTAGGACAACTTCTCGATGTGAGGGGTTGCACAGGCAACTAGCCAAATGGACCATGGGTGTGAAGGAAAATGCTATTGAAATAAGGGATGGACGTAATTCCATTTGGGATTCTGTCTTTGATGCACGTTGTGGTTATTTGGACTTTTTGTGTAAGAAGATGAATAGGTTGGGGGGTAGGTCTGCTACAAGATTCAATGACATTAAGGATTGGGTTAGTAATAAAATAATTGTGTATAGTGAAGCAGATGTCTCTAGTGGTGAGGGTAATGAAAATCTTAGTGATGAAGTGGGATCTACATTGAAAGATCCAATTAGAGTTGGTTCCAAGGGCTGTGCTGCTGGTTCGTCTACTCAAGCAAGAAGACGACCTCATAAATGCAGGCAATGTGGTGTTGTTGGTCACAACAGGACAACATGCCCACACAAAAGGAAATTTGATGCCTTCGTTGAGTCAGGAGTTCATGAAGACGGTGTAAGTCACGTCTCCACTGAAGGTGTTTAG 1620 0.4142 MENNNENVDENVVGLEDIVSEDEVDTASDYDPDQFVFVVDSEADFVKLNQEMLCVENVSKFNFPNLEVAYDFYNWYGKKTGFSARKSKVRKNAMGEIYEKTYLCHREGKRPNNMKPEKGKKKRPAKPETRCSCPAKMKVRLDGPSGRWNVSKFCDAHNHDMLPPKYEGMLPAHRKMSVADILEMNNMRDAGISTPQIYGSFASQSGGYNNVGFRKRDLYNEIGRQRMLQLSDVKGAIKYLREREVNEGSMFWRYTTDCEADGGNERQDAFSRVITDGDLAMRNAIKRVLPNAHHRLCAWHLCRNAASNVKNPKMVSMFRKCMLGDYEVYEFKHRWEVMVKEFRLEDNNWVKEMYDKKRMWATGYIRGKFFEGFRTTSRCEGLHRQLAKWTMGVKENAIEIRDGRNSIWDSVFDARCGYLDFLCKKMNRLGGRSATRFNDIKDWVSNKIIVYSEADVSSGEGNENLSDEVGSTLKDPIRVGSKGCAAGSSTQARRRPHKCRQCGVVGHNRTTCPHKRKFDAFVESGVHEDGVSHVSTEGV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi264g00009 539 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 56 386 IPR031052 GO:0006355
Sebi264g00009 539 Pfam MULE transposase domain 271 304 IPR018289 -
Sebi264g00009 539 MobiDBLite consensus disorder prediction 108 130 - -
Sebi264g00009 539 Pfam FAR1 DNA-binding domain 71 162 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi264g00009 Sebi-Chr264 314248 316624 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi264g00009 FAR1 1.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi264g00009 - - ahf:112728364 315.849