Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi262g00027 ATGGAAGACTTAAACAAGTGGCTATCCTTCTATATGAATGAAAGTATCAACCATGACTTTGCCATCAGAAGGTTTTGCCCTGCAAGAATGGAGCAAGAGCAAGGAGGAGAGTGCCAAGACCATGAGGCAGTACTTGATGAGATTGAATTATGTTTTTCTGATGCTACCAGCACTCCTTGTTTGGCTTCCACAGAGGTTGATGATTTTGTTGATAGCTTCATCAACATGGATCAGTGTGAGTATGACAAAGAAGATCAAGAATCCCAAGAGAAGCACCAAAGTTTTGATCACTTTGTGGTGAATGAAGAAGATGACCCTGATGCTGATGCATACTCCATGGTGAATGATGTCATTGGATATGTTCCTACCACCATGGAGGATGAAGAATTGGAGATCTATGAAAATGTTGCAATTCCCATGGAGGAGGAAGAAGTTGAAATGAGTGGCTCTTTTGGTGCTATACCTGAGCTTGTTCCATGTGCAGAAGAGGCCAGCCTTGGCATGGACCAAGGATTAGACTTGGTTCACATGTTATTGGCATGTGCTGAGGCTGTAGGCTGCAGAGACACCCAGCAAGCAGAGTTGCTTCTTAACAGAATCTGGGCTTTGGCAAGTCCTTCAGGAGATTCATTGCAGAGAGTCTCCTACTGTTTTGCCACAGGATTGAAGTGTAGGTTGTCACTTCTTCCTCATAATGTCATCACAAATGGTACATTAACAAGTACTTCTATTGATGTCCCTTTGATAACTAGGGAGAATAAGTTGGAAGCTTTTCAACTCCTTTACCAAACCACACCTTACATTGCTTTTGGTTTCATGGCTGCAAATGAAGTTATTTGTCAAGCATCAAAAGGAAAGAGCTCCATACACATAATTGATCTAGGAATGGAGCATACCCTTCAATGGCCTTCCCTTATAAGGGCCCTTGCTTCAAGGCCTGAAGGGCCACCAAAGCTCCGGATCACAGGACTAAACAGCAATGAAAACAACCCAAAACTTCAAACAACCATGGATAAGCTTGTGGAGGAAGCAAGCTCATTGGGTATACCACTTGAGTTCCACATAATATCAGAGCCTGCAACCCCATCTCTTCTTACTATGGAGAAGCTTAACTTGAGAGAAGGTGAAGCTTTGTTTGTTAACAGTATCTTACAGTTGCACAAATATGTCAAAGAAAGTAGAGGCTATCTGAAGGAAATTCTCCAATCAATAAAGAAGCTAAGTCCAACAGCTCTTACAGTGGTAGAGCAAGACACAAACCATAATGGTCCATTCTTCCTTGGGAGATTTTTGGAATCACTGCATTATTACTCAGCTATATTTGATTCTCTTGAGGCAAGTATGCCAAGAAATAGCCAACAGAGAATGAAAATAGAGAGATTACACTTTGCAGAGGAAATTCTTAATATTGTAGCTTGTGAAGGTCCAGATAGAATGGAAAGACATGAAAGGGTAGATCAATGGAGAAGACAATTAGGCAGAGCAGGATTTCAGGTAATGCCACTGAAGTGCACAAGCCAAGCTAGAATGATGCTTTCTGTTTATGACTGTGATGGATATACATTTTCCAGTGAGAAGGGTAGCCTTCTACTTGGGTGGAAAGGAAGGCCAGTAATGATGGCTTCTGCATGGCAAGTGGCAAGTGTATGA 1650 0.4194 MEDLNKWLSFYMNESINHDFAIRRFCPARMEQEQGGECQDHEAVLDEIELCFSDATSTPCLASTEVDDFVDSFINMDQCEYDKEDQESQEKHQSFDHFVVNEEDDPDADAYSMVNDVIGYVPTTMEDEELEIYENVAIPMEEEEVEMSGSFGAIPELVPCAEEASLGMDQGLDLVHMLLACAEAVGCRDTQQAELLLNRIWALASPSGDSLQRVSYCFATGLKCRLSLLPHNVITNGTLTSTSIDVPLITRENKLEAFQLLYQTTPYIAFGFMAANEVICQASKGKSSIHIIDLGMEHTLQWPSLIRALASRPEGPPKLRITGLNSNENNPKLQTTMDKLVEEASSLGIPLEFHIISEPATPSLLTMEKLNLREGEALFVNSILQLHKYVKESRGYLKEILQSIKKLSPTALTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEASMPRNSQQRMKIERLHFAEEILNIVACEGPDRMERHERVDQWRRQLGRAGFQVMPLKCTSQARMMLSVYDCDGYTFSSEKGSLLLGWKGRPVMMASAWQVASV 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi262g00027 549 Pfam GRAS domain family 174 545 IPR005202 -
Sebi262g00027 549 ProSiteProfiles GRAS family profile. 165 545 IPR005202 -
Sebi262g00027 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 128 544 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi262g00027 Sebi-Chr262 1065936 1067585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi262g00027 169 549 GRAS Transcription Factor Family AT1G66350 39.896 1.05e-83 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi262g00027 GRAS 3.1e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi262g00027 - - gmx:100814931 900.197