Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi262g00026 ATGGAACAATCAAGATTCAACAAACAGCTTCAATGCGATAACATGGACCCTAGAAGTGAGGAATTCCAGCCTGGATCTCAGTCTGTAATGCAGAACTATCTGGATGGCATGCATACTAATAGAAGACCATCTGACCATTACACATCAGATGTTAAACCAGTACTTAATTATTCAATACAGACCGGTGAGGAATTTGCTCTTGAATTTATGAGAGATAGGGTGAATCTCAGGAAGCCTGCATTTTCAAATGTCAGTGATTCCAATTATACAACTAGTTATATGGAACTGAAAGGCGTTTTAGGCATCAGTCATGCAGGATCTGAAAGTGGGTCCGGCATTTCTATGCTCTCAACGGTTGATAAAGCCCCAACAGAGTTTAACAGACAGAGTACATCATTACATGGGGATAGAAGCAATTATGGGTCAATTCGATCAATACCGAGAACTTCATTGAATCAAGAGACTAGTCAATTTGTGCGTGGGTATGGCTCTTCTGTTGGTTCTGATAGCACATCAATGACAATGAAGTGTCTTTGTAGCTTTGGTGGTAGAATATTACCACGACCGAGTGATGGAAAACTGAGTAGCATTGGTGATGATTCTGAGGTTCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGGATCAAGAAACAACTCAACCCCACTTGGTGTCAGCTTTTCAGCAGATGATTTACATGGATTGGACAGGCAAACTATGGATAGGGAGACTAGTAGAGTTGCTGTAGAATCTATAGGTGTCAACAATGCTCCATTGACTAATGGATTTGATTCTTCATCAGCTGTTCAGTCTTCAAAACCAATATTACCAACTTCTTCAAATGCTTATGAACCTGATCAACTGTCCTATGGTGACCAAATGATACAAGTTGGGGAAACTAGTCATCAATATCTTGTTCACCATGGCCTTAATCCTGCTCCTAACCCTGTGGTTGGAGAGACTCCTATTTCTATGGCTCCTCATCTGCTGAATAATCAACAAAGGATTCTGAATCAAGACCATCCACCTAGTGGATTACGGATGCAAAATTCAGAATTGCCTACAATGCAGGAGAAAAAGATAGTTGATGGTTCAGTTAAACAAGAGAATGATCCTGGTAAAGTTTTATCCTCGGAAACCCCATCCCCAGCTCCCTCACAGCCCTTTGATGGTTACCTGAAAAATAATTATCATGAAGCATCAGTTGTAGTTACCATGCCGGAGGGGCATCTACCTTCACTGCCTTCAACAAAAAAGGTTCAGCACCAGGATTATGAAGATGCCTCTTCTACAACTAGCAGTTTATTTGTTCCTGCTTATATGGATTCCCAGTCCAATGACATTGATTTGAGTTGTCTTCATCCTCCTCCACTTCCTAAAAGAGTTTACTACTCAGAAAGAACTCCCAGGGAGCAAGTAGAGGTCCTGAATCGGTCCTCAAAGTCAGATGACACTCACAGATCTCAGTTTCATGTGTCGGATTTACTTTCTGATGTCAAGCCAGAGGATCCAGTAACAGAAACTGGTGACAACTTGCATGATGGTAATCTATTAAATCCAACTGAAAATTTGAGTATTGCAGCAAAGCCCTTGTCTGCAGATGACCATACAAATGACAATGGGTTTGCCAAACATCAAATGAATAATCTGTTGCCTGATGCAAATGGTCAGATTAAGTCACACCTATCTGAGCACACGGGTCCGGAGTTGAAGCAGCTGTTACTGAGCGATGACGCAAGTAAAGATGTGGAAACTGAACATTCTTGCAAAGATAATCATATCAGGCCCTTGCTTGATGAAACCAAAACCAAAGATGATAATTCAGATCTTCCTGCTATGCATCACGTTTCCTCTGTTAAGCACCTTGATGATCCAGCATCCAATCTTCCAGAGATTGATTGGGGTGAGGCCTCTGGGAAGGAATATAATGACAATCATATGATGCAAGAACTACCTGTTTCTTTAGCTGGGAATATAACCAAAGATGTTTCTCAGGACTTTCCTCCAAATGTTGTTTCCAAACAAGCAGAAGGTGACATTCTCATTGATATTGATGATCGATTTCCCCGTGAACTGCTTTCTGATATGTTTTCTAAAGCAATTCTTGCAGAAGATCCCTCCAGTCAATATGCACTATCCCCAAATGGAATAGGCTTAAGCATAAATATGGAAAATCATGAACCTAAACGGTGGTCTTATTTTCAAAAGTTGGCACAAGAAGGGCTTGATAATGTCTCTCTTATTGATCAGGATCATCTTGGCTTTCCACCTATGATAGGAAAAACTGGAGATAATAGAGATCATCATGCTATGCCTCTAACAACTGATGGAGTTCCTCTAGATCATGAGGATTCCCACCTCAATTTTGGTGAAGAAAATCAGGAGGACTTACATAGAAGGATTGGAATAGAAACCACTGTTCTGAAGTCCAATTATGATCAATCCCAACTTACGGACACTGAAAGTATGCAGTTTGATGCTATGATGGAAAACCTAAGAGCACATGAGTCAGAGTATGAGGATGGCAAGTTTGAAAAAAAAAATTGCAATCTACCTCCACTTGATCCTTCTTTAGGAGATTTTGATATCAGTACTGTGCAGGTCATTAAGAATGAAGATCTTGAAGAGTTGAGGGAACTAGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGAGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAGAGCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGATTGACTGTAGAGTTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGCGTGGTACAGGATGGACCAGGAGGAACGATGGCCACAGTTACAGAATTTATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACTTGAAAGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAAAGAAATACCTTGGTTACTGGTGGTGTGCGGGGGACTCTACCTTGGATGGCACCAGAGCTGTTGAATGGAAGCAGCAACAAGGTCTCGGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAAATTCTAACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATTATAGGTGGGATTGTAAATAACACATTAAGGCCAACCATTCCAAGTCATTGTGATCCTGAATGGAAAACATTGATGGAGCAATGTTGGGCACCCAATCCTGGAGCCAGGCCTGCCTTCACAGAAATTGCAAGTCGGTTGCGCATAATGTCTGCAGCAGCTAGCCAAACAAAAACACAGGGCCAAAAGGCATCTAAATGA 3471 0.4123 MEQSRFNKQLQCDNMDPRSEEFQPGSQSVMQNYLDGMHTNRRPSDHYTSDVKPVLNYSIQTGEEFALEFMRDRVNLRKPAFSNVSDSNYTTSYMELKGVLGISHAGSESGSGISMLSTVDKAPTEFNRQSTSLHGDRSNYGSIRSIPRTSLNQETSQFVRGYGSSVGSDSTSMTMKCLCSFGGRILPRPSDGKLSSIGDDSEVQYVVAVNGMDLGSRNNSTPLGVSFSADDLHGLDRQTMDRETSRVAVESIGVNNAPLTNGFDSSSAVQSSKPILPTSSNAYEPDQLSYGDQMIQVGETSHQYLVHHGLNPAPNPVVGETPISMAPHLLNNQQRILNQDHPPSGLRMQNSELPTMQEKKIVDGSVKQENDPGKVLSSETPSPAPSQPFDGYLKNNYHEASVVVTMPEGHLPSLPSTKKVQHQDYEDASSTTSSLFVPAYMDSQSNDIDLSCLHPPPLPKRVYYSERTPREQVEVLNRSSKSDDTHRSQFHVSDLLSDVKPEDPVTETGDNLHDGNLLNPTENLSIAAKPLSADDHTNDNGFAKHQMNNLLPDANGQIKSHLSEHTGPELKQLLLSDDASKDVETEHSCKDNHIRPLLDETKTKDDNSDLPAMHHVSSVKHLDDPASNLPEIDWGEASGKEYNDNHMMQELPVSLAGNITKDVSQDFPPNVVSKQAEGDILIDIDDRFPRELLSDMFSKAILAEDPSSQYALSPNGIGLSINMENHEPKRWSYFQKLAQEGLDNVSLIDQDHLGFPPMIGKTGDNRDHHAMPLTTDGVPLDHEDSHLNFGEENQEDLHRRIGIETTVLKSNYDQSQLTDTESMQFDAMMENLRAHESEYEDGKFEKKNCNLPPLDPSLGDFDISTVQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSHCDPEWKTLMEQCWAPNPGARPAFTEIASRLRIMSAAASQTKTQGQKASK 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi262g00026 1156 ProSitePatterns Serine/Threonine protein kinases active-site signature. 999 1011 IPR008271 GO:0004672|GO:0006468
Sebi262g00026 1156 MobiDBLite consensus disorder prediction 476 509 - -
Sebi262g00026 1156 ProSitePatterns Protein kinases ATP-binding region signature. 880 905 IPR017441 GO:0005524
Sebi262g00026 1156 MobiDBLite consensus disorder prediction 476 520 - -
Sebi262g00026 1156 MobiDBLite consensus disorder prediction 364 393 - -
Sebi262g00026 1156 CDD STKc_MAP3K-like 880 1137 - -
Sebi262g00026 1156 ProSiteProfiles Protein kinase domain profile. 874 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi262g00026 1156 PANTHER SERINE-THREONINE PROTEIN KINASE 204 1138 - -
Sebi262g00026 1156 Gene3D Transferase(Phosphotransferase) domain 1 962 1156 - -
Sebi262g00026 1156 PRINTS Tyrosine kinase catalytic domain signature 1064 1086 IPR001245 GO:0004672|GO:0006468
Sebi262g00026 1156 PRINTS Tyrosine kinase catalytic domain signature 956 969 IPR001245 GO:0004672|GO:0006468
Sebi262g00026 1156 PRINTS Tyrosine kinase catalytic domain signature 993 1011 IPR001245 GO:0004672|GO:0006468
Sebi262g00026 1156 PRINTS Tyrosine kinase catalytic domain signature 1108 1130 IPR001245 GO:0004672|GO:0006468
Sebi262g00026 1156 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 867 961 - -
Sebi262g00026 1156 MobiDBLite consensus disorder prediction 371 385 - -
Sebi262g00026 1156 Gene3D Phosphorylase Kinase; domain 1 867 961 - -
Sebi262g00026 1156 SMART serkin_6 874 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi262g00026 1156 MobiDBLite consensus disorder prediction 584 609 - -
Sebi262g00026 1156 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 962 1154 - -
Sebi262g00026 1156 Pfam Protein tyrosine and serine/threonine kinase 875 1137 IPR001245 GO:0004672|GO:0006468
Sebi262g00026 1156 SUPERFAMILY Protein kinase-like (PK-like) 864 1137 IPR011009 -
Sebi262g00026 1156 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi262g00026 Sebi-Chr262 1054221 1064182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi262g00026 191 550 MAP Kinase Kinase Kinase AT1G16270 31.148 1.11e-19 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Sebi262g00026 PK_Tyr_Ser-Thr 2.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi262g00026 - - gmx:100817937 1532.69