Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi262g00025 ATGGAATTTAACAAGGACTTTATGGATGGTTGTTCTACATTTTGGACTGATGAAAATTGTGAGAGCAACCGAGATGAGTCACGTAATGGGGATGGAAACCCGGTGGGAGACCAAGGTGGGCTGTCATGGGGCGGGAGGATGATACATGAACTAACACATGATGACATTAGACGTCTGGAGTTCGCTTCTAAGGCTGAGGCATATAGTTTTTATTCGGATTATGCCAAACAACGAGGGTTTGCTGTGAGGAAAGATGATATTGAGCGAAATGAGAATGGTGATATTGTTAAGCGGTATTTAGTGTGTAATAAGGAGGGAACAAGGGACAAGAAAAACTTGGAGAGAAAGGACAGAGTGAGGGAGGCGAGGCCAATTACTCGTGTGCAGTGCATAGCAAGGATGCGTGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTTCATTCCACGACGATCATAACCATGAGTTAACTCCTCCAACGTATGTTCACATGATGCCAGCTTATAGACGATTGAGTGAATCTGATAAAGCTCAAATTGATACCCTGCATGCAGCCGGTGTGAGAACTTGCCATATTATGAGTTTTATGATTGGACAGAAAGGGGGACATGGTGAATTAGGTTTCTGTAAAAAGGACATGTATAACCACATTGATAAACAGAAGAGGGCTAATATAGAGGATGGTGATGCATTTGCAGCGCTGTGTTATTTGCAGGGAAAGTATAACGGTGATCCACTAATGCATTGCATGTTCAGGACAACAGACGATGGCAGATTGCAGGACCTATTTTGGTGTGACGGTGCAAGTCGTGTTGATTATCAGTGTTTTGGAGATGTAATAGCATTTGACATGACTTATAAGAAGAACAAATATAACAAGCCTTTGGTTATTTTTTACTGGTACAACCACCATGGGGAGACATGTATATTTGGTTGTGCACTTGTTGTTGATGAGAAAACTGAGACTTACAAGTGGGTTCTCGAGACGTTTTTGGAAGCAATGTTTGGCAAAGAGCCCAGTGCCGTAGTTACAGATGGAGATGCAGCCATGCGAGAAGCGATCAGGGTTGTATTCCCAAGTGTAGTTCACAGACTTTGTTCATGGCACATACACCAAAATGCCTGTGAGAATGTGAAGAATTCAAAATTTCTAGAGGAATTCAAGCGCATGATTTATGGAAAATTCACGGAGGATAGATTTGAAAGGGAGTGGACAAACATGGTTGATAAATTTGGATTATCTAACAATAGGTGGGTCCAGAAAATGTATGACATGAAGAGGTTATGGGCAAATTCATATATGGGAGACACATTTTATGGTGGTGTTAGAACAACGTCTGTGTGTGAGGGGATTAATTCGTTCATTAAGAGGGCGTTAAAGGAGTACAGACACAATGAATTGATTTCTGATTTTAAGTCATTTTACGGAGAACCTGTATTGACCACAACTCTTTTTACCATTGAGGAATGTGCCTCCAAAGTGTTCACTAGGAAAAAGTTTTGGGAAGTTAAGTCTGAGATTGAGAGTGCAGCCGCGTACAATGTAGTGGATAGGGTTGTGACTGGTGAGACTGTGAGGTTGACAATGAATAAATTTTGCAAACCGGATTATGAGTATGATGTTGTATTAGATAAAAGTGAATTGAAGTTCAATTGTGAGTGTAGAATGTTTGAGTCATGTGGCATTCCCTGCCGTCACATTTTTTGTGCAATGAAGAATGAGCACGTGAAAACCATTCCAAGTAGCCTAATACTGAAGCGATGGACAAAATCAGCGAAGCCTGATTTCATGTCCAGTGAGCCCGTTGTGAGGTTAGATAAGGAGAAGGTTGACATGCTAAGGGAGGGAGAGGTGGTGAAGACTAAAGGCGCACCAAGGAAGAGTAGAAGGATGATGAAAGGCAGAAGGTGTTCGAACTGTAGACGAAGAGGACACACTAAGAACAAATGTCCTGGATTGAGTCAACGAGATATTTTAGGGGATGCTGAAGACGATGAATCTTCGTGGGAGAGTGATGGTGCCATGGGAAATGATAAAGGAGAAGTGATGATGGTTGTGTTTGATATACAGGGTGGATTCAGTTGGGGTGATGATTTAACTCTCAGTCAAAGAGGATCGACCGGTACAAGCAAAGGGAAGAGGCGGTGTGTGTCTCAACCATCCCAAACATCCTTCGATCGTGCTGAATTGCAGGGACTACATGACAAGGTTGGTGAAAGACAATCCAAGCAAAGTAGACGTTCAAATGGCAAGCAGAAAAATAAAGGAGTAGACGGAGCAGGAGAGGAGGTGAAGTTTGGACCTAGGAAGATGGGTCCAGGAGCGGGCGTTAACAATGTTAATATGCTCCCAACTTCCCTTTTTCCTCATTTCCCATCAACGAGCATGTATCCCCCTCCCCCATGTCCGCGGCCTCCACCCTATGCTCCGTTTTATGGATATGGGTCATACGGTTATTATGGGCACCCTAAATAG 2481 0.4293 MEFNKDFMDGCSTFWTDENCESNRDESRNGDGNPVGDQGGLSWGGRMIHELTHDDIRRLEFASKAEAYSFYSDYAKQRGFAVRKDDIERNENGDIVKRYLVCNKEGTRDKKNLERKDRVREARPITRVQCIARMRVYLDMRSGKWKVSSFHDDHNHELTPPTYVHMMPAYRRLSESDKAQIDTLHAAGVRTCHIMSFMIGQKGGHGELGFCKKDMYNHIDKQKRANIEDGDAFAALCYLQGKYNGDPLMHCMFRTTDDGRLQDLFWCDGASRVDYQCFGDVIAFDMTYKKNKYNKPLVIFYWYNHHGETCIFGCALVVDEKTETYKWVLETFLEAMFGKEPSAVVTDGDAAMREAIRVVFPSVVHRLCSWHIHQNACENVKNSKFLEEFKRMIYGKFTEDRFEREWTNMVDKFGLSNNRWVQKMYDMKRLWANSYMGDTFYGGVRTTSVCEGINSFIKRALKEYRHNELISDFKSFYGEPVLTTTLFTIEECASKVFTRKKFWEVKSEIESAAAYNVVDRVVTGETVRLTMNKFCKPDYEYDVVLDKSELKFNCECRMFESCGIPCRHIFCAMKNEHVKTIPSSLILKRWTKSAKPDFMSSEPVVRLDKEKVDMLREGEVVKTKGAPRKSRRMMKGRRCSNCRRRGHTKNKCPGLSQRDILGDAEDDESSWESDGAMGNDKGEVMMVVFDIQGGFSWGDDLTLSQRGSTGTSKGKRRCVSQPSQTSFDRAELQGLHDKVGERQSKQSRRSNGKQKNKGVDGAGEEVKFGPRKMGPGAGVNNVNMLPTSLFPHFPSTSMYPPPPCPRPPPYAPFYGYGSYGYYGHPK 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi262g00025 826 PANTHER OS01G0519700 PROTEIN 59 600 - -
Sebi262g00025 826 MobiDBLite consensus disorder prediction 645 679 - -
Sebi262g00025 826 Pfam SWIM zinc finger 541 569 IPR007527 GO:0008270
Sebi262g00025 826 MobiDBLite consensus disorder prediction 700 730 - -
Sebi262g00025 826 SMART 26again6 552 579 IPR006564 GO:0008270
Sebi262g00025 826 SUPERFAMILY Retrovirus zinc finger-like domains 625 655 IPR036875 GO:0003676|GO:0008270
Sebi262g00025 826 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
Sebi262g00025 826 MobiDBLite consensus disorder prediction 731 767 - -
Sebi262g00025 826 ProSiteProfiles Zinc finger SWIM-type profile. 539 577 IPR007527 GO:0008270
Sebi262g00025 826 ProSiteProfiles Zinc finger CCHC-type profile. 637 653 IPR001878 GO:0003676|GO:0008270
Sebi262g00025 826 MobiDBLite consensus disorder prediction 21 41 - -
Sebi262g00025 826 MobiDBLite consensus disorder prediction 700 778 - -
Sebi262g00025 826 Pfam MULE transposase domain 281 375 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi262g00025 Sebi-Chr262 1037774 1040660 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi262g00025 MULE 5.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi262g00025 - - vvo:131629359 716.457