Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi262g00019 ATGTGTGTGTGTTGGACTACTTGCATCCATGTCTCAGCCGCAAATGACAGCTTGAAGCCTGGAGAGACACTGGATACAAATATCACAAGCAAGCTATGTTCTAAAAAAGTTTGGACTGCTAATAGAAATCAACCAGTTGACCCAGATTCTGCAGTTTTATTACTGGATCATTCTGGTGTGCTCAAAATTGAATCCAAAGATGCCAAACCCATAATTCTTTATTCTCCACCTCAAACAATTAACAACACTGTGGCCACGTTGTTGGACACAGGCAACTTTGTGCTGCAACAACTTCATCCCAATGGGATGAAGAGTATGTTGTGGCAAAGTTTTGATTATCCCACTGACAGTTTGCTCCCTGGGATGAAGTTAGGTGTCAGTCACAAAACTGCTCATAACTGGTCTTTGGTTTCATGGTTTAGTCGTTCACTCCCATATCCTGGTCCATTCAGGCTTGATTGGGAACCAAAAAGAAGAGAACTTGTCATTAGTAAAAATGAGCAAGTGTACTGGAGAAGTGGGGAACTGAGAAACAACAGATTTGAGCACGTTTCAGCAGAAGATGAAGCCCAGTACAGCACTGTGTCCAATAAGGATGAAGAGTATTTCACATTCACAACTCCAAAAGAAGAGCTTACAAAGTGGACGCTATTAGAAACTGGACAGATGTTAAACAGGAAAGGGAATGATATTGCAAGGGCTGATATGTGTTATGGTTACAACACTGATGGAGGATGCCAGAAGTGGGAGGAGATACCAACCTGCAGGGGTCATGATTATGAATTTGAGTTCAAGGCTGGTTTACCCCAATTTACACATGAAACTGATCTGAAAAATGTGAGTTATGGCATAAGTGATTGCCAGGCTATTTGCTGGAGCAACTGCAGCTGCATTGGATTCGCATCCTTAAATGATAATGGAACTGGTTGTATGTTGTTCCAATCAATGGAAGGTACTAATATTGCAGGTGGTGGCGAATCCTTTTACATGCTAGTAAAGAAAACCAATCACAAAGACTCAGAGAAATCCCACAAGGGTAAATCAGGTACAACAAAGTGGAAATGGATAATTGCTGCTATAGCAACTGCTCTACTCATAGTCTGCCTTTCCATCATTTGTCGTGCCTTAATGAAAAGAAAATATGTGCTTCAAGGGGGCTCCTCTAGTGGCAACAATCTAGAAGTTGAAATAAATGATGGAGATGACTTAAAAGTATTTAGCTATGCAACCATAATGGAGGCTACCAATGGCTTTTCATCTGAAAACAAGTTAGGACAGGGAGGTTTTGGACCTGTTTTTAAGGGGATTCTATCTTCAGGGCAAGAAGTTGCTGTGAAAAAGCTTTCAAAAACTTCTGGACAAGGAGTTATTGAATTTAAAAATGAATTAACACTCATATCTAAGCTCCAGCACACAAATCTCGTTCAGCTACTCGGTCACTGCATTCATGAACAAGAGAGGATGTTGGTCTATGAGTATATGGCAAACAAAAGCTTGGACTTCTTTTTATTTGATTCTAGTGGAAGAAAGTTACTAGATTGGAACAAGCGCTTTAGCATAATAGAAGGAATTGCTCAAGGATTACTATACCTTCACAAATACTCAAGACTCAGAATTATCCACAGAGATTTGAAGGCTAGTAACATACTCCTGGATGAGAATATGAACCCAAAAATTTCTGATTTTGGTGTAGCAAGAATGTTTACAAAACATGAATCCGAAGCAAATACCAACAGGATTGTTGGGACATAG 1752 0.3995 MCVCWTTCIHVSAANDSLKPGETLDTNITSKLCSKKVWTANRNQPVDPDSAVLLLDHSGVLKIESKDAKPIILYSPPQTINNTVATLLDTGNFVLQQLHPNGMKSMLWQSFDYPTDSLLPGMKLGVSHKTAHNWSLVSWFSRSLPYPGPFRLDWEPKRRELVISKNEQVYWRSGELRNNRFEHVSAEDEAQYSTVSNKDEEYFTFTTPKEELTKWTLLETGQMLNRKGNDIARADMCYGYNTDGGCQKWEEIPTCRGHDYEFEFKAGLPQFTHETDLKNVSYGISDCQAICWSNCSCIGFASLNDNGTGCMLFQSMEGTNIAGGGESFYMLVKKTNHKDSEKSHKGKSGTTKWKWIIAAIATALLIVCLSIICRALMKRKYVLQGGSSSGNNLEVEINDGDDLKVFSYATIMEATNGFSSENKLGQGGFGPVFKGILSSGQEVAVKKLSKTSGQGVIEFKNELTLISKLQHTNLVQLLGHCIHEQERMLVYEYMANKSLDFFLFDSSGRKLLDWNKRFSIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDENMNPKISDFGVARMFTKHESEANTNRIVGT 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi262g00019 583 Gene3D Transferase(Phosphotransferase) domain 1 494 583 - -
Sebi262g00019 583 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 387 493 - -
Sebi262g00019 583 Pfam PAN-like domain 268 313 IPR003609 -
Sebi262g00019 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Sebi262g00019 583 SMART blect_4 15 114 IPR001480 -
Sebi262g00019 583 SUPERFAMILY Protein kinase-like (PK-like) 403 583 IPR011009 -
Sebi262g00019 583 Gene3D Phosphorylase Kinase; domain 1 384 493 - -
Sebi262g00019 583 Pfam Protein tyrosine and serine/threonine kinase 421 574 IPR001245 GO:0004672|GO:0006468
Sebi262g00019 583 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 494 583 - -
Sebi262g00019 583 SMART serkin_6 418 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi262g00019 583 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 94 583 - -
Sebi262g00019 583 Pfam D-mannose binding lectin 37 139 IPR001480 -
Sebi262g00019 583 ProSiteProfiles Protein kinase domain profile. 418 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi262g00019 583 SUPERFAMILY alpha-D-mannose-specific plant lectins 36 141 IPR036426 -
Sebi262g00019 583 Gene3D - 15 112 IPR036426 -
Sebi262g00019 583 ProSiteProfiles Bulb-type lectin domain profile. 1 108 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi262g00019 Sebi-Chr262 924506 927319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi262g00019 356 583 Receptor kinase-like Gene Family AT4G23190 52.632 2.26e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi262g00019 PK_Tyr_Ser-Thr 2.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi262g00019 - - lja:Lj3g3v0392830.2 830.861