Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi261g00052 ATGGCAGTGGGAGGTGATGATTTGCTCAGTGAAAAAGCAGCCATGATGAGAGAGTCTCTGCAGAAGAGCCAGACCATCACGGACAACGTTGTCACCATTCTTGGTTCCTTTGACCACCGTCTCTCTGCCCTTGAAACCGCCATGCGTCCAACTCAGATTAGAACTCATTCTATTAGGAAAGCTCATGAAAATATTGACAAGACTTTGAAGGCTGCAGAGGTTATATTGGCTCACTTTGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGGCCACATGAAGACCTGGAAAACTATCTTGAAGCAATTGATAAGTTGAGAAGCAACATTCAATTTTTTAGTAGTAAGAAGGGTTTTAAGAGTACTGATGGCGTCGTTGGCCATGCTAATAATTTGCTAGCTAAAGCTATTTCTAAACTAGAGGATGAGTTTAAGCAGCTATTATCATCTTACAGCAAACCTGTGGAGCCTGAGCGCCTCTTTGATTGCCTTCCAAACTCTATGCGACCTTCGTCAGGATCACCTGGCCATGAGGGTGATCACAGTGGCAAGAATCCTACTCATCACCATTCCGAGTCTCAGAACAATAATGCTGACGCTGTTGTGTACACACCTCCTGCTCTTATACCACCAAGAATTTTGCCCCTGCTACATGATTTAGCTCAGCAAATGATTGAAGCTGGTCACCGGAAACAGTTACTCAAAATATACAGGTAA 720 0.4347 MAVGGDDLLSEKAAMMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEVILAHFDQYRQAEAKILKGPHEDLENYLEAIDKLRSNIQFFSSKKGFKSTDGVVGHANNLLAKAISKLEDEFKQLLSSYSKPVEPERLFDCLPNSMRPSSGSPGHEGDHSGKNPTHHHSESQNNNADAVVYTPPALIPPRILPLLHDLAQQMIEAGHRKQLLKIYR 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi261g00052 239 Coils Coil 97 117 - -
Sebi261g00052 239 PANTHER EXOCYST COMPLEX PROTEIN EXO70 56 238 IPR004140 GO:0000145|GO:0006887
Sebi261g00052 239 SUPERFAMILY Cullin repeat-like 75 238 IPR016159 -
Sebi261g00052 239 Gene3D Exocyst complex component Exo70 73 239 - -
Sebi261g00052 239 MobiDBLite consensus disorder prediction 163 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi261g00052 Sebi-Chr261 799929 802714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi261g00052 9 239 EXO70 exocyst subunit family AT5G52340 66.094 1.78e-103 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi261g00052 K07195 - gmx:100777735 414.461