Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi261g00042 ATGTTTTCTAGGTTGATACGCCCCCATGAAGGGACTGTTGTGCAGGAAGACATGCAGGGTGGTGCGAATCACACTCACCTTGGAGACCCCTGTCTTGTTCTGACTTCTGATCCCAAACCTCGCCTTCGTTGGACTGCTGACCTTCACGAACGGTTTGTTGATGCTGTCACTCAACTTGGGGGTGCCAGTAAAGCCACACCAAAAGCGATTATGAGGACCATGAATGTCAAGGGTTTGACACTCTATCATTTAAAGAGTCATCTTCAGAAGTACAGGCTTGGTAAACAATCTGGAAAAGAATCCGATGAGGGAGGCAAAGATGTATCCTTTTCAATAGATCAGTTACCTGTTTGTTCTCTGCCCCCTTGCTCAGAGAAAGGAATATCAGCTTCATATCTTCTAGAAAGCCCTGGTACTGATAACTCATCTCCAAAGTTACCAGCTTCTGATGCAAATGAGGGTCATGAAGTCAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAACTACATTTACTAGTGGAGGCAGAGAAGCACTTGCAAATTCGCCAGGACGCAGAGCGGAGATATATGGCCATGCTTGAGAGAGCATGTAAGATGTTGGCTGATCAATTTATTGGCGATACAATTATAGACACAGACAGCCAAAAATTCCAAGGACTGGAAAGTAAAGCATCTAGAAGTTCCTTAGCGGATCCCTTTGGCTTTTGCTCCATACCGAGTGCTGAGGTAGGCGGAATGCATGTTTCAGAAGTACCACAGATGCTCCAACCTCAAGGGGCTGACTGTTCGACTGAAAGTTGCCTAACATCACTGGAGAGTCTCGGAGGGTTGACACTAGAAGGATCTCCAGGTGGGACAAAGAAGAGGATGCTGAGCTTGGACTCAATGGTAACACCTTTGATGTGGAGTGAAACCAACATGAGAACTCAAGGCATCCAATTAGCCCAAATCAATCCTCAAGGAATTACTAGTGACCACCTTGCTTTGCTTTATACGAGGAGTTTCAGGATTTTGGTGGCTCCTCCTCCCCCTTCCCCCTTCTAA 1050 0.461 MFSRLIRPHEGTVVQEDMQGGANHTHLGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKESDEGGKDVSFSIDQLPVCSLPPCSEKGISASYLLESPGTDNSSPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGDTIIDTDSQKFQGLESKASRSSLADPFGFCSIPSAEVGGMHVSEVPQMLQPQGADCSTESCLTSLESLGGLTLEGSPGGTKKRMLSLDSMVTPLMWSETNMRTQGIQLAQINPQGITSDHLALLYTRSFRILVAPPPPSPF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi261g00042 349 MobiDBLite consensus disorder prediction 134 153 - -
Sebi261g00042 349 MobiDBLite consensus disorder prediction 134 148 - -
Sebi261g00042 349 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Sebi261g00042 349 Pfam MYB-CC type transfactor, LHEQLE motif 156 201 IPR025756 -
Sebi261g00042 349 Gene3D - 38 96 - -
Sebi261g00042 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Sebi261g00042 349 FunFam Myb family transcription factor 38 96 - -
Sebi261g00042 349 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 275 IPR044848 GO:0003700
Sebi261g00042 349 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Sebi261g00042 349 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi261g00042 Sebi-Chr261 689633 693441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi261g00042 8 273 G2-like Transcription Factor Family AT3G24120 44.604 2.51e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi261g00042 Myb_DNA-binding 1.6e-06 CL0123