Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi261g00034 ATGGCTCTTCGCACTATCGCTCCCGGCTTCCGATTTCACCCCACTGATGAAGAGCTCGTTAGCTTCTACCTGAAACGCAAGGTCACCGGAAGACCCTTCCACATCGACCCGATCGCCGTCATCGAAATCTACAAATTCGAGCCCTGGGACCTTCCTTGTCGGTCGAAGCTGAAGACCAGGGACCTAGAATGGTACTTCTTCACGGCGCTGGACAAGAAGTACGGCAACGGTTCCAGGACCAACCGTGCCACCGAGAAAGGCTACTGGAAGACCACCGGCAAGGATCGCGCCATCAAGAATGGCGAACGCACCGTCGGAATGAAGAAAACCCTCGTTTACCACATAGGTCGCGCTCCACACGGCGATCGCACTAATTGGGTCATGCATGAATACAGGATGGTCGATGAGCAATTGGCCCAAGCTGGAGTATTGCAGGATGCTTATGTGCTGTGTAGGATTTTCGAAAAGAGTGGTCAAGGACCCAAGAACGGGGAGAAGTATGGGGCCCCTTTCATAGAAGAGGAATGGGATGATGATGCAGTGGTAGATGCCGTGCCCGTGCCCGTTCAGTCCTTGCCGGCTGTTGATGATGAGGATTTGAAGGAGGTGTCTGCTATTGGTGCTTATATTGAAAATAAGGACCTTGACAAGAACCTTGATGATACAAATGTTACAATTGGAACTGCTGGTTTTTCATCAAACTTCCATCATGGAGAGTGTAGTAGCCATCCTCAGCATTTTGATCAGAAGCCATTGGTGGGAACTTTTGGAATTTATGGGCCTCAAAATGACCGGCCTTTTAATATGGCTGAGCAATATGATATGGACACCAATGCGGTGAAAGATGGAGACACTGTTGAGCTGAACCATGATGGAAATTCTCTGAATTTCAGTTATCCTTTTGATGATCTGGATGTGTACTTTGATGCCACTGGTTATCCTCTGAGTTTTGATGATGGATCATTCCTGGAAACCAATGATCTTGTGAATCTGGGTGAGGGTAATCCCACTGAGGCAGATCCTTCTGGTACTGATATGCTAGATGAGTATCTTGCATGCAGTGATGACGATATTCTCAAGTATATATCTTTTGATTCTCCTCAGAATACAGAGAGTCAAAGCCCTGTTATTGACCAAGGACCTGCTTCTGTTGAGAAGAGTGTGGAGGGAGATATTTCCCTGGCAAGCAAACATGTTTTTGATGAAGCACAATCCAGCAATGAAGCTTCTTCAAAACATAATCCACAGGCGTCCAAGATGGTATCAGGAGAGACAAATCCATTCGTAAAGCAGGCCAATAAATTGTTGGCCAGCATACCTGCTCCACCAGCATTTGCTTCAGAGTTTCCTACTAAGGAGTTTGCTCTTGGGCTTCATCCTGCTGCTCAGTCTTCCAATTCAGCTCATGTAACTGCAGGTATGATCAGCATAACAGACATTACTTTAAGAGGAGAGGCGATGGATTGGATGGTGGGCAAGAATGGAGGGTTTAATAATCCCCTTATGTCTACTGGGTTTTCTCAACCTGGTGTTAACTCTGCTGCTTTGATGCCTATTTGTGGCTTGGTTTCTAGCAAGACTGCATTTGTGTTGTCGCATGGCTGGATTTTCTTGATGAGTTTTTCGGTTCTGATTCTCTCATTGAGTTTCAAGATTGGATGCATCATGTATAGTGGTAAATGA 1683 0.4629 MALRTIAPGFRFHPTDEELVSFYLKRKVTGRPFHIDPIAVIEIYKFEPWDLPCRSKLKTRDLEWYFFTALDKKYGNGSRTNRATEKGYWKTTGKDRAIKNGERTVGMKKTLVYHIGRAPHGDRTNWVMHEYRMVDEQLAQAGVLQDAYVLCRIFEKSGQGPKNGEKYGAPFIEEEWDDDAVVDAVPVPVQSLPAVDDEDLKEVSAIGAYIENKDLDKNLDDTNVTIGTAGFSSNFHHGECSSHPQHFDQKPLVGTFGIYGPQNDRPFNMAEQYDMDTNAVKDGDTVELNHDGNSLNFSYPFDDLDVYFDATGYPLSFDDGSFLETNDLVNLGEGNPTEADPSGTDMLDEYLACSDDDILKYISFDSPQNTESQSPVIDQGPASVEKSVEGDISLASKHVFDEAQSSNEASSKHNPQASKMVSGETNPFVKQANKLLASIPAPPAFASEFPTKEFALGLHPAAQSSNSAHVTAGMISITDITLRGEAMDWMVGKNGGFNNPLMSTGFSQPGVNSAALMPICGLVSSKTAFVLSHGWIFLMSFSVLILSLSFKIGCIMYSGK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi261g00034 560 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 245 - -
Sebi261g00034 560 MobiDBLite consensus disorder prediction 366 388 - -
Sebi261g00034 560 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Sebi261g00034 560 MobiDBLite consensus disorder prediction 403 422 - -
Sebi261g00034 560 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Sebi261g00034 560 FunFam Nac domain-containing protein 86 15 159 - -
Sebi261g00034 560 MobiDBLite consensus disorder prediction 366 380 - -
Sebi261g00034 560 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Sebi261g00034 560 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi261g00034 Sebi-Chr261 541001 543564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi261g00034 2 552 NAC Transcription Factor Family AT5G04410 40.772 2.14e-124 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi261g00034 NAM 1.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi261g00034 - - aprc:113871167 691.034