Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi261g00031 ATGTCAGGAGAGGAAATTTGGTCATCAGCTGAGGAAGAATCTAGTGAATCTCTGCCTCCATTTGATAACAGGAATGGCTACAATTCAAGAACAGGCATTTATCACTCTCTTGTTAGGCTTGGAACCAAGCATGAAATCCCAACAAAGCTTGATCTTAACACTGCCAGTCTTGTGCTATCACAGTTCCCACATGCAGACATTGCTGAGGCAAGAATTGCATTCATTGATTCAAGTACTAATCAGAGAGTAAGCTATGGTGAGCTTCGCAGGTCTATTTACTCCCTTGCATCAGCTTTGTTCCATGGACTTGAGATTAGGAAAGGGGATGTGGTGTTTGTATTGTCCCCAAACTCAATCTTATACTCAACCATATGTCTAGCTGTGTTATCTGTTGGAGCAATTCTAACCACTGCCAATCCCCTCAATACTGAGTCAGAAATTGCCAAACAAGTGTGTGATTCAGGTGCTAAACTAGCCATCTCAGCACCAGAGGAGCTACACAAATTAGTCCCAACTGGGGTGCCTAGAATTCTCACCTCTCGTCCATCTGATGGGAATTTGTTGTCAGTTGAAGAGTTAATAGAAGGCTGCTATAATTCACAAGAGTTGCCACATGTTCCTGTGGCACAATCAGACACTGCTGCTATACTTTACTCTTCAGGGACTACAGGGGTAAGCAAAGGTGTAGTTTTGACACATGCAAATCTCATTGCCATAATGAAACTACTCTTCTGGTCTGCTGATGTATCTGCATCCCAAGATGATGTTTTCTTGGCATTCATTCCAATGTTTCACATATATGGATTGGTATTCTTTGGATTGGGGCTGTTGTGTGTTGGTGTTACAACAGTTTTGATGCAGAAATTTGACTTCCAAGCTATGCTTGTTGCTATCCACAAGCACAAAGTTAACAACTTACCAGCAGTTCCACCAGTGATCCATGCATTGGTAAAATATGCAAGCAAAGCTGGGTTTGATTTGTCCAGTCTAAGAAAGGTGGGGTCAGGGGCTGCACCTTTGAGTAAGGAAGTGGCACAGGAGTTTAGAAAGAAGTTTCCTTGGGTTGAACTAAGGCAAGGTTATGGGCTAACAGAGAGTTGTGGTGCAGCAACATTTTTTGTGTCTGATAAAGATGCTAAAGCTCATCCAGACTCATGTGGGAAGCTGATTCCAACATTCTGTGCAAAAGTGGTAGACACTGAAACAGGAAAGCCCTTGCCTCCTCACAAGGAGGGAGAGTTATGGCTGAAAAGTCCTACTATTATGAAAGGATATCTAGGAAATTTGGAGGCAACAACTGCAACAATTGATCCAGAAGGTTGGTTGAGGACAGGTGATCTTGGTTATATTGATGACAATGGATTTGTTCATGTAGTTGAACGGATAAAGGAGCTAATCAAGCATAAAGGGTATCAGGTGGCTCCGGCAGAACTGGAATCTGTACTGCTAAGTCATCCCCATATTGTTGATGCAGCAGTTATACCGGTTGAAGATGAAGAAACTGGACAAATGCCAATGGCATATGTGGTGAGAGCAGCTGGCTCTGAACTCTCAGAAGACCAAGTCATTCAATTTGTTGCTGGCCAGGTGGCTCCATATAAGAAAGTGAGAATTGTGAGTTTCATTGACACTATACCAAGGTCAGCTGCTGGCAAGATATTGCGGAAGGATCTTGTTTCTAGAACCAAATATCAACTTGTCTCTAAGTTATGA 1713 0.4267 MSGEEIWSSAEEESSESLPPFDNRNGYNSRTGIYHSLVRLGTKHEIPTKLDLNTASLVLSQFPHADIAEARIAFIDSSTNQRVSYGELRRSIYSLASALFHGLEIRKGDVVFVLSPNSILYSTICLAVLSVGAILTTANPLNTESEIAKQVCDSGAKLAISAPEELHKLVPTGVPRILTSRPSDGNLLSVEELIEGCYNSQELPHVPVAQSDTAAILYSSGTTGVSKGVVLTHANLIAIMKLLFWSADVSASQDDVFLAFIPMFHIYGLVFFGLGLLCVGVTTVLMQKFDFQAMLVAIHKHKVNNLPAVPPVIHALVKYASKAGFDLSSLRKVGSGAAPLSKEVAQEFRKKFPWVELRQGYGLTESCGAATFFVSDKDAKAHPDSCGKLIPTFCAKVVDTETGKPLPPHKEGELWLKSPTIMKGYLGNLEATTATIDPEGWLRTGDLGYIDDNGFVHVVERIKELIKHKGYQVAPAELESVLLSHPHIVDAAVIPVEDEETGQMPMAYVVRAAGSELSEDQVIQFVAGQVAPYKKVRIVSFIDTIPRSAAGKILRKDLVSRTKYQLVSKL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi261g00031 570 CDD 4CL 46 558 - -
Sebi261g00031 570 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 559 - -
Sebi261g00031 570 Gene3D - 42 463 IPR042099 -
Sebi261g00031 570 SUPERFAMILY Acetyl-CoA synthetase-like 64 561 - -
Sebi261g00031 570 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Sebi261g00031 570 Pfam AMP-binding enzyme 70 467 IPR000873 -
Sebi261g00031 570 Gene3D - 464 566 IPR045851 -
Sebi261g00031 570 ProSitePatterns EF-hand calcium-binding domain. 76 88 IPR018247 -
Sebi261g00031 570 FunFam 4-coumarate--CoA ligase 2 464 565 - -
Sebi261g00031 570 Pfam AMP-binding enzyme C-terminal domain 477 552 IPR025110 -
Sebi261g00031 570 MobiDBLite consensus disorder prediction 1 24 - -
Sebi261g00031 570 FunFam Long-chain-fatty-acid--CoA ligase FadD 44 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi261g00031 Sebi-Chr261 519596 521862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi261g00031 22 559 Monolignol Biosynthesis Gene Families AT1G20500 45.155 1.02e-156 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi261g00031 K10526 - gmx:100783104 931.013