Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi261g00020 ATGGCAAAGGCCATGGAGGAAATAAGAAGCGCGCCTTCTTCACGTCGACATGGAGATGATTCTTTGCCACATATTCACAAAGTGGAAGCTCCTCCTAAGCAGTCACTATTACAAGAAATCAAATATTCTATCATTGAGACTTTCTTCTCAGACGACCCCTTAGGCAAATTTAAGGACCAAAGCCACTCAAAAAAGTTTATTCTAGCCCTGCAATCAGTCTTCCCCATTCTAGATTGGGGAAGAGATTACAATATTACAAAATTTAAGGGTGATTTAATTGCTGGTTTTACTATTGCAAGTCTATGTATTCCTCAGGACATTGCATATGCAAAGCTTGCAAACTTGGATCCCCAATATGGACTACATACTAGTTTTGTGGCTCCTCTGGTTTATGCTTTCATGGGAAGCTCAAGAGATAATGCCATGGGACCAGTAGCTGTGGTGTCTCTCTTGCTTGGGACCATGCTTACTAATGAGATTAGTAACTACAGAAGTCATGAATATCTACGACTTGCATTTACTGCCACCTTCTTTGCAGGAATCACTCAGATGGCACTTGGAGTTTTTAGGTTGGGTTTCTTGATTGACTTCCTATCTCATGCTGCAATTTTGGGATTTATGGGTGGAGCTGCTATTACTATTGCATTGCAACAACTTAAAGTTTGGAGTTCAGTGCACCATGGGTGGAATTGGGAGACAATAGCCATTGGAGTAGCATTCTTGGTCTTTCTTCTTATAGCCAAGGCAGACAAGAAAGGTGTATCAATTGTGAAAAATGTAAAAAAGGGTGTGAATCCAATATCTTTTAGTGAAATTTATTTTAGTGGAAAATATCTTGGTGCTGGTGTTCGAATTGGTGTGGTAGCTGGTATGATAGCACTCACAGAATCTATAGCAATTGGGAGAATATTTGCTGCAATGAAAGACTATTCATTGGACGGCAATAAAGAAATGGTGGCAATGGGAACAATGAATGTTATTGGTTCCCTGACATCATGTTATGTGGCTACAGGAGGTTTTGGTCGGTCAGCAGTGAATGATATGGCGGGGTGTAAAACAGCTGCATCAAACATTGTTATGTCAATTATTGTACTATTAACTATGATACTCATTACACCACTATTTAAGTACACTCCAAATGCAGTGCTTGCTTCAATTATTATAGCTGCTGTGATGAGCCTTGTGGACATTAAGGCAATTGTTCTTTTGTGGAAGATTGACAAATTCGATTTTGTAGCTTGTATGGGAGCCTTTTTTGGTGTGATATTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTGGCAATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGGCCAAGGACTGCAGTACTTGGGGAGCTTCCAGGGACTGCTGTTTATAGAAACATCCAACAATATCCCAAAGCAACTCAGATTCCTGGCATGCTGATTATTAGAGTTGACTCTGCAATATACTTCTCAAACTCCAACTATGTCAAGGACAGGATTTTGAAATGGCTGACTGATGAAGAGGTCCAAAGGACAAGAAGTGAATTTCCCAAAATACAGTATCTCATTGTTGAAATGTCACCTGTTACTGATATAGACACTAGTGGCATCCATGCATTTGAAGATTTATTAAAGAGCCTTCATAAAAGAGAAGTCCAGCTTCTCCTGGCAAACCCAGGGCCAATTGTAACAGAGAAGCTCAACACATCCAAGTTATCGAGCTTGATTGGGGAAGGTAATATTTTTCTATCGGTGGCTGATGCCGTTGCAACTTTTGGTGTAAAGGGTGGAGAAGTGTGA 1794 0.4013 MAKAMEEIRSAPSSRRHGDDSLPHIHKVEAPPKQSLLQEIKYSIIETFFSDDPLGKFKDQSHSKKFILALQSVFPILDWGRDYNITKFKGDLIAGFTIASLCIPQDIAYAKLANLDPQYGLHTSFVAPLVYAFMGSSRDNAMGPVAVVSLLLGTMLTNEISNYRSHEYLRLAFTATFFAGITQMALGVFRLGFLIDFLSHAAILGFMGGAAITIALQQLKVWSSVHHGWNWETIAIGVAFLVFLLIAKADKKGVSIVKNVKKGVNPISFSEIYFSGKYLGAGVRIGVVAGMIALTESIAIGRIFAAMKDYSLDGNKEMVAMGTMNVIGSLTSCYVATGGFGRSAVNDMAGCKTAASNIVMSIIVLLTMILITPLFKYTPNAVLASIIIAAVMSLVDIKAIVLLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGELPGTAVYRNIQQYPKATQIPGMLIIRVDSAIYFSNSNYVKDRILKWLTDEEVQRTRSEFPKIQYLIVEMSPVTDIDTSGIHAFEDLLKSLHKREVQLLLANPGPIVTEKLNTSKLSSLIGEGNIFLSVADAVATFGVKGGEV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi261g00020 597 ProSiteProfiles STAS domain profile. 467 590 IPR002645 -
Sebi261g00020 597 Pfam Sulfate permease family 88 226 IPR011547 GO:0016020
Sebi261g00020 597 Pfam Sulfate permease family 232 415 IPR011547 GO:0016020
Sebi261g00020 597 NCBIfam sulfate permease 233 586 IPR001902 GO:0016020|GO:0055085
Sebi261g00020 597 SUPERFAMILY SpoIIaa-like 469 590 IPR036513 -
Sebi261g00020 597 FunFam Sulfate transporter 31 447 593 - -
Sebi261g00020 597 PANTHER SULFATE TRANSPORTER 237 588 IPR001902 GO:0016020|GO:0055085
Sebi261g00020 597 CDD STAS_SulP_like_sulfate_transporter 468 583 - -
Sebi261g00020 597 MobiDBLite consensus disorder prediction 1 25 - -
Sebi261g00020 597 Gene3D STAS domain 447 592 IPR036513 -
Sebi261g00020 597 Pfam STAS domain 468 586 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi261g00020 Sebi-Chr261 352061 356064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi261g00020 13 593 Inorganic Solute Cotransporters AT1G22150 65.457 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi261g00020 K17470 - gmx:100784124 919.457