Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi261g00002 ATGGAGAAGGATTTTGATTCCAAGCTGAAGATTCAGGGGAATTCTAACTCTTCCAATGGTGGTGGTGGGAATGTCCAGAGATCCAAGAGCTTTGCTTTTAGGGCTCCCCAGGAGAATTACACCATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTAAGAGCAAAGAAGAAGGACACAGGGACTGTGTATGCATTGAAGATCATGGACAAAAAATTTATTACCAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCATAGTGCTTGATCAATTGGATCATCCTGGCATTGTGAGGCTATATTTCACATTTCAAGACACATTTTCTCTGTATATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGTCTTACTGAGGATGAGGCACGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATACATACATAGTTTGGGAGTGATACATCGTGATATTAAGCCAGAGAACTTATTACTTACAGGTGATGGACATATTAAAATAGCTGATTTTGGGAGTGCGAAGCCTATGCAGGATAGCCAAATCACTGTCCTTCCAAATGCAGCATCAGATGACAAGGCCTGCACATTTGTCGGAACAGCTGCTTATGTTCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGATCTCTGGGCACTTGGCTGCACATTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATAGCAAGAGAAATTCGATTTCCAGATTACTTTTCAGAGGAATCAAGAGACCTTATTGACCGGCTATTGGACCTGGACCCTAGCAGGAGACCAGGTGCAGGACCTGATGGTTATGCTACTCTGAAAAGGCATCCCTTTTTCAAGGGGGTTGACTGGAATAACTTAAGGGCACAAATTCCTCCAAAACTTGCTCTGGAACCTGGGACTCAGTCCCCTGCAGGTGATGATGGTCAAGAGTCATCTTGGAGTCCTGCTCACGTTGGGGATGGTTCTGCAGCTTCTGTTAGACAACCTGATGGCGCTACATCGTCTTCCGAGGGTACTGGTCACATAACCCGGCTAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAGTTTTTGGATCCTGGGGAATCTGTTCTTATGATCTCTATGGTGAAGAAATTACAAAAAATAACAAGCAAGAAGGTGCAGCTCATCCTCACCAACAAGCCAAAGTTGATCTATGTGGATCCATCAAAATTAATTGTGAAGGGAAATATAATATGGTCTGATAATCCAAATGATTTAAGCATTCAAGTGACTAGTCCATCACATTTCAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAGGATGCAAAGCAAAGAGCAAATCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGGTGA 1473 0.4202 MEKDFDSKLKIQGNSNSSNGGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDTFSLYMALESCEGGELFDQITRKGRLTEDEARFYAAEVVDALEYIHSLGVIHRDIKPENLLLTGDGHIKIADFGSAKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRFPDYFSEESRDLIDRLLDLDPSRRPGAGPDGYATLKRHPFFKGVDWNNLRAQIPPKLALEPGTQSPAGDDGQESSWSPAHVGDGSAASVRQPDGATSSSEGTGHITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKITSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTSPSHFKICTPKKVMSFEDAKQRANQWKKAIEGLQNR 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi261g00002 490 PANTHER SERINE/THREONINE-PROTEIN KINASE 36 328 - -
Sebi261g00002 490 SUPERFAMILY PH domain-like 306 489 - -
Sebi261g00002 490 FunFam 3-phosphoinositide-dependent protein kinase 2-like 43 128 - -
Sebi261g00002 490 FunFam 3-phosphoinositide-dependent protein kinase 1 361 490 - -
Sebi261g00002 490 Coils Coil 470 490 - -
Sebi261g00002 490 FunFam 3-phosphoinositide-dependent protein kinase 2-like 129 327 - -
Sebi261g00002 490 Gene3D Transferase(Phosphotransferase) domain 1 129 327 - -
Sebi261g00002 490 Pfam Protein kinase domain 47 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi261g00002 490 MobiDBLite consensus disorder prediction 1 26 - -
Sebi261g00002 490 Gene3D Phosphorylase Kinase; domain 1 43 128 - -
Sebi261g00002 490 Pfam PH domain 387 489 IPR033931 -
Sebi261g00002 490 Gene3D - 364 490 IPR011993 -
Sebi261g00002 490 MobiDBLite consensus disorder prediction 10 26 - -
Sebi261g00002 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Sebi261g00002 490 MobiDBLite consensus disorder prediction 328 373 - -
Sebi261g00002 490 CDD STKc_PDK1 43 312 IPR039046 GO:0004674
Sebi261g00002 490 SUPERFAMILY Protein kinase-like (PK-like) 42 358 IPR011009 -
Sebi261g00002 490 SMART serkin_6 45 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi261g00002 490 ProSiteProfiles Protein kinase domain profile. 45 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi261g00002 Sebi-Chr261 52630 66950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi261g00002 1 490 AGC Kinase Gene Family AT3G10540 83.265 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Sebi261g00002 Pkinase 4.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi261g00002 K06276 - gmx:100801891 901.353