Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi260g00005 ATGGCCAATGTTGGAGGAAGACAAGGGCTGGTCCTCCCTGTGAAAATTGTAACTGAACTGCTAGAAGAGGACCAAGAAATATTGCATGTCAAGCAACCAAATGGCCATGTCGAACCATGGGTCCTGCTCTGTAACACAAAAATCCAGAAACATTGCATGTTGGGCCAAGGATGGTACCAATTTTGCAAAGAACAACAACTTCAAGCAGGGGATGTACTTGAATTTTGTCATTTCAGTGGACAACATTTCGTGATGGTAGTCGTCAAGCCTGCAAATCCATAG 282 0.4397 MANVGGRQGLVLPVKIVTELLEEDQEILHVKQPNGHVEPWVLLCNTKIQKHCMLGQGWYQFCKEQQLQAGDVLEFCHFSGQHFVMVVVKPANP 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi260g00005 93 CDD B3_DNA 3 89 IPR003340 GO:0003677
Sebi260g00005 93 Gene3D - 1 90 IPR015300 -
Sebi260g00005 93 ProSiteProfiles B3 DNA-binding domain profile. 1 91 IPR003340 GO:0003677
Sebi260g00005 93 Pfam B3 DNA binding domain 3 86 IPR003340 GO:0003677
Sebi260g00005 93 SUPERFAMILY DNA-binding pseudobarrel domain 3 88 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi260g00005 Sebi-Chr260 160879 161249 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi260g00005 B3 3.8e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi260g00005 - K10877 tpra:123891884 39.2762