Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi25g00077 ATGGATTCACCTCCTTCCTGTGATACATATGTGGCATACTTTGCTCAGTCACCAAATTTTTTGACCCTGATAAGTATATCTGATATATTTGACACCAGTCCTCTATCCATTGCAAGAGCAAGTAACATGAACAATGAGTATGACAAGCTTATTCCAGGCCAACTCTTGTTGGTACCTGTATCTTGTGGTTGCAGTGGAAACCACTCTTTTGCTAATATCTCATACGTCATCAAGCAAGGTGAAAGCTACTACTATCTTTCAACCACTTCCTATGAGAATCTCACCAATTGGCAAACAGTGGAAGATTCAAACCCTCACCTAAATCCATATTTGTTACCAGTAGGCACCAAAGTAGTGATCCCTTTGTTCTGTAGGTGCCCTTCAAACAACCAGTTGGAGAAAGGGATAGAGTATCTTATTACTTATGTGTGGCAGCTAAATGACAACGTTTCCTCTGTAGCTGCAAAGTTTGGTGCATCACCAGGGGACATAATGACTGAAAACTACTTCGGCCACAACTTCACTGCTGCAACAAACCATCCTGTTTTATCCCAGAAGAGGAAGGGTAGTGAGAATAGGAGTATGGCATCTGTGGAGACTGCAGATAAGTTAATTTCTGGAGTTTCAGGCTATGTAAGTAAGCCAACTGTATATGAAGTTGGTATGATTATGGAAGCTACCATGAACCTTAATGAACAGTGCAGGATTGGAGAATCAGTGTACAAGGCCAAAATGGATGGTCAGATTTTAGCTGTGAAAAAAGTCAAGGAAGATGTCACAGAGGAGGTGATGATTCTGCATAAGGTAAATCATGCAAATCTAGTGAAACTAATAGGTGTCTCTTCAGGATATGATGAAAATCACTTCCTTGTTTATGAATATGCTGAAAATGGATCTCTTCATGACTGGTTGTTCTCCAAGTCTTCAACTGTTTCAAGCTCAGTGTCATTGGCTTTCCTCACATGGAGTCAGAGGATAAGTATAGCTATTGATGTTGCCATGGGTCTGCAATACTTGCATGAACACACTGAACCAAGTATAGTCCACAGGGACATCACATCAAGTAATATCCTTCTTGACTCAAACTTTAAGGCCAAGATAGCAAATTTTTCTTTGGCCAGAACTTCAATGAATCCTATGATAAAAAAAGTTGATGTCTTTGCTTATGGAGTGGTTCTGTTGGAGTTACTGACAGGCAAGAAATCCTTCATAAACAATGAAAATGGTGAGGTGACTATGTTGTGGAAAGATATTAGGGGTATCTTTGATGTAGAAGATAAGAGAAAAGAAAGGCTTAGAAGATGGATGGATCCTAAGCTTGGGGGATTTTATCCTCTTGATGATGCTCTCAGCTTGGCCTCCTTGGCAGTGAATTGCACAGCAGAGAAGTCTTTGTCCAGACCAACCATGGGAGAAGTTGTTCTTAGCCTCTCCCTTCTCACTCAACACTCTCCTACCACAATAGAGAGATCATGGAATTATGGGATAGATGTAGATGTTACTGAAATGGTTATTCCCATCGTAGCTCGCTGA 1533 0.4064 MDSPPSCDTYVAYFAQSPNFLTLISISDIFDTSPLSIARASNMNNEYDKLIPGQLLLVPVSCGCSGNHSFANISYVIKQGESYYYLSTTSYENLTNWQTVEDSNPHLNPYLLPVGTKVVIPLFCRCPSNNQLEKGIEYLITYVWQLNDNVSSVAAKFGASPGDIMTENYFGHNFTAATNHPVLSQKRKGSENRSMASVETADKLISGVSGYVSKPTVYEVGMIMEATMNLNEQCRIGESVYKAKMDGQILAVKKVKEDVTEEVMILHKVNHANLVKLIGVSSGYDENHFLVYEYAENGSLHDWLFSKSSTVSSSVSLAFLTWSQRISIAIDVAMGLQYLHEHTEPSIVHRDITSSNILLDSNFKAKIANFSLARTSMNPMIKKVDVFAYGVVLLELLTGKKSFINNENGEVTMLWKDIRGIFDVEDKRKERLRRWMDPKLGGFYPLDDALSLASLAVNCTAEKSLSRPTMGEVVLSLSLLTQHSPTTIERSWNYGIDVDVTEMVIPIVAR 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi25g00077 510 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 189 485 - -
Sebi25g00077 510 ProSitePatterns Tyrosine protein kinases specific active-site signature. 347 359 IPR008266 GO:0004672|GO:0006468
Sebi25g00077 510 Gene3D Transferase(Phosphotransferase) domain 1 295 379 - -
Sebi25g00077 510 SUPERFAMILY Protein kinase-like (PK-like) 232 478 IPR011009 -
Sebi25g00077 510 ProSiteProfiles Protein kinase domain profile. 198 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi25g00077 510 Gene3D Phosphorylase Kinase; domain 1 206 294 - -
Sebi25g00077 510 Pfam Protein tyrosine and serine/threonine kinase 253 377 IPR001245 GO:0004672|GO:0006468
Sebi25g00077 510 Pfam LysM domain 75 121 IPR018392 -
Sebi25g00077 510 Pfam LysM domain 22 59 IPR018392 -
Sebi25g00077 510 Gene3D Transferase(Phosphotransferase) domain 1 380 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi25g00077 Sebi-Chr25 2779816 2781497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi25g00077 207 484 Receptor kinase-like Gene Family AT2G33580 37.540 1.96e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sebi25g00077 PK_Tyr_Ser-Thr 2.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi25g00077 - - gmx:100301877 664.07