Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi25g00045 ATGGTCTCTGCAGCATTTCACAAGATCAATAGTATTTGTGGGAGGAGGCAAAATTGGCATTTGAAAGTTAAGCTGGTTAGGGCATGGAATATGTGTGTTGTTGCCACCCCATGTGATCCATACGCGATTCAAATGGTATTTGTGGATGAAGAGGGAGGGAAGATAGAGGCTATAGTGCAGAAACAATATATGAATAAGTTTGCAGATTGCATGGTGGAGGGAGAGGTGTACAGGATTACGAAATTTGGTGTGTGTACTAATGGAGGCAAGTTTAGGGCAGTTGGGCATGACTACGAGTTGTTGTTTACATCGTGTACTAAGGTTACTTTGTGCCAAGGAGTTAATATTGCTGGGCTAGGGCTCTCTCTGAAGAAGACTACTGACATCAAGAAAACTAAGGGATTTTCAAGGTACCTTGTGGATAAGGTGGAACTTCTCACATTTGTATCTTGTGAGGGGGACTATATGAAGGACGAAAAGGACATCACAACATTATTCTTGGAGCTTACAGACCCCACGGGAAAGATTGAATGTGTATTGTATGACGAGTATGTTGAAGATCTCCGGGATGCTGGAATAGAAAGTGTCATAGGTGTGACTAGAGTCCTATTATACCCTGACATTCCTGAAGTTTTTCAAATGAACCATTGGTATTCTTTGAAGGTTGAAGTGTCCAATGATAAGGATGCAACCTACCTAATACTGGGTGATGAAGATGTGGAGAGCTTGGTTCATGTTTCGTGTAAAGATTTGTTGTCATCCATGCATACAAGGTCTACTATTGTTAGGCTGTTAGGTGAGCAAGGAGTTGCAGAACATTTCAACCACTTGGATGGGAGCTCTTATGCAAGCGCTATTCCTGCGGATAATTTCACCTCCGACAGATCATTTCATGCTGAACCTTCTTCTTCAGCTAGCGCTGCTTTCAACAATATGGCGACCAATATCAGTAATGAGGAAGAAAGTTACCAACCAATTTACAAGGAATGTGTTCACTTCACCAGTAACAACGAATGA 1017 0.4189 MVSAAFHKINSICGRRQNWHLKVKLVRAWNMCVVATPCDPYAIQMVFVDEEGGKIEAIVQKQYMNKFADCMVEGEVYRITKFGVCTNGGKFRAVGHDYELLFTSCTKVTLCQGVNIAGLGLSLKKTTDIKKTKGFSRYLVDKVELLTFVSCEGDYMKDEKDITTLFLELTDPTGKIECVLYDEYVEDLRDAGIESVIGVTRVLLYPDIPEVFQMNHWYSLKVEVSNDKDATYLILGDEDVESLVHVSCKDLLSSMHTRSTIVRLLGEQGVAEHFNHLDGSSYASAIPADNFTSDRSFHAEPSSSASAAFNNMATNISNEEESYQPIYKECVHFTSNNE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi25g00045 338 CDD RPA1_DBD_A_like 21 108 - -
Sebi25g00045 338 SUPERFAMILY Nucleic acid-binding proteins 5 113 IPR012340 -
Sebi25g00045 338 Gene3D - 5 113 IPR012340 -
Sebi25g00045 338 Pfam Domain of unknown function DUF223 45 114 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi25g00045 Sebi-Chr25 1267166 1270366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi25g00045 9 218 Core DNA Replication Machinery Family AT5G45400 20.502 4.12e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi25g00045 - - lja:Lj6g3v0884310.1 143.28