Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi259g00029 GTAACCAGATTGGTCAAATCTGGGACTAGGAAAACAACATTAGCTATTGGAGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGTGTTGGAATAAGTGGTGTGGAAGGAATGCAGGCTGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGATATTTGGAACGACTACTTTTGGTGCATGGACATTGGTGTTACCGGAGGATCTCATCTATGATATGCTATTTTTTCTACAAGAATGTCACATTTGGTTTTACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGAGTACCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCGTCACTTCCCGTGATTGCTCTTGGGGTATTTGACCAGGATGTATCTGCTCGGTACTGCTTGAAGTTTCCTTTGTTATATCAAGAAGGAGTACAGAATGTCCTTTTCAGCTGGCGCCGAATTCTCAGCTGGATGCTTAATGGATTTATTAGTGCCTTAATAATTTTCTTCTTCTGCACAAAAGCAATAGAGCTCCAAGCCTTTGATGAGGAAGGTAGAACAGCTGGGAGAGATATACTGGGAGCAACCATGTATACTTGTATAGTTTGGGTTGTAAACTTGCAGATGGCACTAGCTATAAGTTACTTCACCATGATCCAACATTTTTTCATCTGGGGTTCCATTGCTTTCTGGTACATTTTTCTCCTGATATATGGAGCAATGCCTCCAAATCTATCTGAAAATGCTTACAAAGTCTTCATTGAAACTCTTGCTCCTTCCCCTTCATATTGGATTGTCACATTCTTTGTGGTGATCACAACCCTTGTACCATACTTCTCATATTCAGCAATAAAGATGAGGTTCTTTCCCATGTATCATGAAATGGTACAGTGGATAAGGTATGAGGGGAAGACTAAGGATCCTGAGTTCTGTGAAATGGTGCAGCAGAGGTCATTGCAGCTTATGACTGTTGGTTCATCAGCACGCTTAGCAGCCAAGGCAAACCAATTTAGAGAAAGAAATATTAATCTTAGATAA 1050 0.4 VTRLVKSGTRKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTLFLYEVYASFSGVPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFISALIIFFFCTKAIELQAFDEEGRTAGRDILGATMYTCIVWVVNLQMALAISYFTMIQHFFIWGSIAFWYIFLLIYGAMPPNLSENAYKVFIETLAPSPSYWIVTFFVVITTLVPYFSYSAIKMRFFPMYHEMVQWIRYEGKTKDPEFCEMVQQRSLQLMTVGSSARLAAKANQFRERNINLR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi259g00029 349 Gene3D - 1 61 IPR023214 -
Sebi259g00029 349 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 294 IPR023298 -
Sebi259g00029 349 NCBIfam HAD-IC family P-type ATPase 10 99 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi259g00029 349 Pfam Phospholipid-translocating P-type ATPase C-terminal 44 294 IPR032630 -
Sebi259g00029 349 SUPERFAMILY HAD-like 9 71 IPR036412 -
Sebi259g00029 349 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi259g00029 Sebi-Chr259 1119419 1120952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi259g00029 1 336 Primary Pumps ATPases AT3G25610 77.976 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi259g00029 K01530 - gmx:100781421 622.468