Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi259g00013 ATGATATCTAACAGAGAATCTGCACGCAGATCAAGGATGAGGAAACAGAAACACTTAGATGAACTCTGGTCACAGGTTCTTAGACTCAGGACTGAGAATCACAACCTTATTGATAAACTGAACCATGTGTCTGAGTCACATGATAAGGTTCTTCAAGAAAATGCACGCCTCAAAGAAGAAGCTTCTGATCTTCGCCAAATGCTAGCTGATCTTCAAGTTGGAACTTCTTTTACTAACAACATAACAGATTTTGATGAGGATTTTTGCAACACATCATCACAACTTAGATCTGAGTCCTCATATGAATCACTCACTTCTATGGACATGCTATTAAAATGA 339 0.3805 MISNRESARRSRMRKQKHLDELWSQVLRLRTENHNLIDKLNHVSESHDKVLQENARLKEEASDLRQMLADLQVGTSFTNNITDFDEDFCNTSSQLRSESSYESLTSMDMLLK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi259g00013 112 CDD bZIP_plant_GBF1 1 48 IPR045314 GO:0003700|GO:0006355
Sebi259g00013 112 FunFam BZIP transcription factor 1 45 - -
Sebi259g00013 112 Gene3D - 1 49 - -
Sebi259g00013 112 Coils Coil 40 74 - -
Sebi259g00013 112 SMART brlzneu 1 56 IPR004827 GO:0003700|GO:0006355
Sebi259g00013 112 SUPERFAMILY Leucine zipper domain 1 46 IPR046347 GO:0003700|GO:0006355
Sebi259g00013 112 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 1 57 IPR004827 GO:0003700|GO:0006355
Sebi259g00013 112 Pfam bZIP transcription factor 1 54 IPR004827 GO:0003700|GO:0006355
Sebi259g00013 112 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 79 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi259g00013 Sebi-Chr259 579613 579951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi259g00013 1 78 bZIP Transcription Factor Family AT3G30530 71.795 1.66e-37 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi259g00013 bZIP_1 9.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi259g00013 - - qsa:O6P43_025616 167.162