Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi258g00085 ATGGTGATGGTTAGTGTGTTGAATGATGCTCTGAAGAGCATGTACAATGCTGAGAAAAGGGGAAAGCGCCAAGTCATGATCAGGCCATCTTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCACAAGCATGGATACATTGGAGAGTTTGAGTATGTTGATGACCACGGGGCTGGCAAAATTGTGGTTGAATTGAATGGTAGGCTGAATAAGTGTGGGGTTATTAGTCCCCGTTTTGATGTGGGTGTCAAAGAGATTGAAGGTTGGATTGCTAGGCTTCTCCCCTCAAGACAGGTTTCAGGCTCCAATTTTTGTCAAGGAGCTCCTTGCTAA 333 0.4414 MVMVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMHKHGYIGEFEYVDDHGAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWIARLLPSRQVSGSNFCQGAPC 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi258g00085 110 Pfam Ribosomal protein S8 7 86 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sebi258g00085 110 Gene3D - 70 101 - -
Sebi258g00085 110 Gene3D - 1 69 - -
Sebi258g00085 110 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 99 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sebi258g00085 110 SUPERFAMILY Ribosomal protein S8 3 98 IPR035987 GO:0003735|GO:0005840|GO:0006412
Sebi258g00085 110 FunFam 40S ribosomal protein S15a 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi258g00085 Sebi-Chr258 1219269 1219965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi258g00085 1 98 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 92.857 4.45e-64 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi258g00085 K02957 - tcc:18590745 187.963