Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi258g00066 ATGGGGAGTGGAAACATGAACCTTCCTCCTGGGTTTTACTTCTCTCCTACAGATGAAGAACTTGTCCTTCACTTTCTCTATTCCAAGGCTTCTTTACCATGCCATCCCAACATTATACCTGATCTTGACTTGTCTCTGCTTGATCCTTGGGAATTCAATGGTAAAGCTTTGTCAAGTGGAAATCAACACTATTTCTTCACTGAAAAGAAGGGAAACAGATCCACAGAAAATGGATATTGGAAGGAAATAGGAGTCACCAATTCAATATTCTCATCAGATGCTGACAATAAAGTTGGAATCAAGAAGTACCTAGTGTTCAACCTTGGGAAAGCTCCACAAGGGACTGAAACCAATTGGGTAATGGAAGAATATCATATTTGCTCATCTGGGTTTAACACTGCTTCTTGTGGAAGTACTAGGAGAAGAAGAAATTCTGTAAGTGATTTTATTGTTTTGTTAATTAAAACAATCAAGATCAAAGTTGGAGCAAATGGGTTTTATGCAGAGTATATGAAAAGAGGTCACAATCCCAACAAGGTGCAAAGTGGTATAGCGATGAGGATGACAGTGGAACAGAGGTTTCATGGCTAG 591 0.3909 MGSGNMNLPPGFYFSPTDEELVLHFLYSKASLPCHPNIIPDLDLSLLDPWEFNGKALSSGNQHYFFTEKKGNRSTENGYWKEIGVTNSIFSSDADNKVGIKKYLVFNLGKAPQGTETNWVMEEYHICSSGFNTASCGSTRRRRNSVSDFIVLLIKTIKIKVGANGFYAEYMKRGHNPNKVQSGIAMRMTVEQRFHG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi258g00066 196 Gene3D NAC domain 17 160 IPR036093 GO:0003677|GO:0006355
Sebi258g00066 196 SUPERFAMILY NAC domain 4 131 IPR036093 GO:0003677|GO:0006355
Sebi258g00066 196 ProSiteProfiles NAC domain profile. 8 141 IPR003441 GO:0003677|GO:0006355
Sebi258g00066 196 Pfam No apical meristem (NAM) protein 9 126 IPR003441 GO:0003677|GO:0006355
Sebi258g00066 196 PANTHER NAC TRANSCRIPTION FACTOR 56 6 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi258g00066 Sebi-Chr258 959599 960405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi258g00066 1 154 NAC Transcription Factor Family AT1G61110 39.521 1.20e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi258g00066 NAM 9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi258g00066 - - gmx:100779578 226.868