Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi258g00064 ATGAAGATGCAAGGCTGTGAGGTTGAGGCCATTGGCATCAACTACAAGATCTACACACAAAAAACGGATCACCCTTTTAAAATCTTCAGCAAATCTCCACAACTAGATACTGAACCAGAAGAGGAAGCAAAAGCTGAAAAAAGTTGCAGTGGAGTTAGGCATGTCCTCAAGAATGTGAGTTGCCAAGCCAAGCCATGGGAGATTCTAGCAATTGTTGGGCCAAGTGGAGCTGGAAAATCATCATTGCTTGAGATCCTAGCTGGTAAACACAGTCCACAAAGTGGTTCTGTGATGGTGAACAAGAAGCCTGTGGACAAAGCTCAGTTCAGAAAGTTTTCAGGGTATGTTACACAAAAGGATACTTTGTTTCCCTTACTTACAGTTGAAGAAACCATGATGTTTAGTGCAAAGCTAAGGCTAAAGCTTCCTCAAGACCAACTATGTTCCAGGGTCAAGTCACTGATTCATGAGCTTGGACTTGACCATGTTGCTGGCACTAGAATTGGTGATGAAAGGGTCCGAGGTATATCTGGTGGAGAGAGGCGCAGAGTTTCTATTGGTGTTGAAGTCATACATGATCCAAAAGTGCTGATTCTTGATGAACCAACTTCAGGGCTTGACAGTACCTCTGCTTTGCAAATAATTGACATGCTTAAGGTCATGACTGACACTAGGGGCAGAACTATAATACTCAGTATCCATCAACCTGGGTTCAGAATTGTGAAGCTGTTCAGTTCTTTGTTGTTGTTAGCTAATGGTTCTGTGTTACACCATGGCACTGCAGATTTGCTTGGTGTGAATCTACGATTAATGGGTCTAGAGCTTCCCCTTCATGTTAATGTAGTTGAATTTGCCATTGACTCCATTGATGTCATTCAGCAGCAAGAAAAGTGTCAGCTAGTTCAGCTAGAAACGCCAATGCAATTGCCAGGGACAATGCAACAGAAGAAAGGTGATGATGAACCAGGTGGTGAGAGTAAAAGTGGTAAGTTTACTCTGCAACAGCTCTTTCAACAATCCAAGGTAATTGATGAGGAAAGCATTAATGCTGGAATTGATTTCTCTTGTGATTTTGCTAATTCTAGATTGAGAGAAACTATGATTCTCACTCATAGGTTCTCCAAAAACATCTTTCGTACAAAAGAGCTCTTTGCATGTAGGACAATTCAGATGCTGATATCTGGGCTCGTTTTGGGGTCTATCTTTTGTAACCTCAAGGATGGTTTAGAGGGAGCAGAAGAAAGGGTGGGTTTATTTGCTTTTATATTAACATTTTTGTTATCAAGCAGCATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACATCTTGTGGAAGCTACCGTGTGTCATCCTATGCCATTGCCAATGGCCTAGTTTATTTGCCATTTCTTCTCATCTTGGCCATTTTGTTCACAATGCCCTTATACTGGCTTGTTGGGCTCAACCGGAATTTCATGGCATTTTTGCACTTTTTGTTGCTGATATGGCTGATTCTTTATACTGCCAATTCAGTTGTGGTGTGTTTCAGTGCTCTAGTTCCTAACTTCATTGTTGGAAATTCAGTGATTGCTGGTGTTATCGGGTCTTTCTTCTTGTTCTCTGGATACTTCATATCAAGGAATGAAATTCCAAATTACTGGATTTTCATGCATTATATATCTCTGTTTAAGTATCCCTTTGAAGGGTTCCTGATCAATGAGTTCTCCAACTCAGGGAAGTGCTTTGATTACATGTTTGGGGGATGTGTGATGAGAGGAGAGGATGTGCTTAAAGAAGAAGGTTATGGAGGAGAGAATAGCAGATGGAAGAATGTTGGGGTCACAGTGTGCTTCATCTTGGTTTACAGGTTCATTTCTTATGTTATTCTTAGATACAGATGCTCACAGAGGGGGTTCAGCAGTGTTGTCATCATCTAA 1935 0.4114 MKMQGCEVEAIGINYKIYTQKTDHPFKIFSKSPQLDTEPEEEAKAEKSCSGVRHVLKNVSCQAKPWEILAIVGPSGAGKSSLLEILAGKHSPQSGSVMVNKKPVDKAQFRKFSGYVTQKDTLFPLLTVEETMMFSAKLRLKLPQDQLCSRVKSLIHELGLDHVAGTRIGDERVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMTDTRGRTIILSIHQPGFRIVKLFSSLLLLANGSVLHHGTADLLGVNLRLMGLELPLHVNVVEFAIDSIDVIQQQEKCQLVQLETPMQLPGTMQQKKGDDEPGGESKSGKFTLQQLFQQSKVIDEESINAGIDFSCDFANSRLRETMILTHRFSKNIFRTKELFACRTIQMLISGLVLGSIFCNLKDGLEGAEERVGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFTMPLYWLVGLNRNFMAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISRNEIPNYWIFMHYISLFKYPFEGFLINEFSNSGKCFDYMFGGCVMRGEDVLKEEGYGGENSRWKNVGVTVCFILVYRFISYVILRYRCSQRGFSSVVII 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi258g00064 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 262 IPR027417 -
Sebi258g00064 644 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524|GO:0016887
Sebi258g00064 644 Pfam ABC transporter 56 204 IPR003439 GO:0005524
Sebi258g00064 644 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 624 - -
Sebi258g00064 644 Gene3D - 43 285 IPR027417 -
Sebi258g00064 644 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 277 IPR003439 GO:0005524
Sebi258g00064 644 SMART AAA_5 65 254 IPR003593 GO:0016887
Sebi258g00064 644 FunFam ABC transporter G family member 5 41 301 - -
Sebi258g00064 644 Pfam ABC-2 type transporter 366 574 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi258g00064 Sebi-Chr258 931538 933472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi258g00064 54 296 Calmodulin-binding Proteins AT2G36910 24.603 1.17e-15 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi258g00064 K05681 - gmx:100789722 1113.6