Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi258g00045 ATGTCTGTGCCTCCAAGTAGTGCCTTGTACCTTTCCCAGGCCACTGAACACAGTAATTTTGAGGGTGAAAGCTTCCACAAGTTTTTTGATTGTTGGATATCTGAGCAAAGCCAACACCTGAATGACCTTTTAGCAGCTGAATCAAATCAGGTTCCAAGTGAGAGAGCACAAGCACTGATTGAGAAGGTGATTGATCATTATGAGTTATACTACAAGGCTAAGTCAAGGTGGGCAAAACATGATGTTCTTGCCATGTTGTCCCCATCTTGGAGGAGCTCTTTAGAAGAGGCTTTTCTTTGGATTGGTGGGTGGAGACCTAGCATGGCATTCCACTTGCTATATTCCAAATCAAGCTTGCAATTTGAGGCCAGGTTGAATGAACTTATTCAAGGGATAAGAACATGTGACCTGGGGGATCTGTCAGCTGCTCAACTTTCTGAGTTTGATGATATGCAAAGAAGGGCCATCAAAGAGGAGAGAGAAATCACAGATATGATGGCAAAGCATCAGGAAACAGTGGCTGATGCTCCAATGGTGGAGTTATCTCATGTGGTTACTGAGATGATTAGAGCTAATGAAAGTGGAGAGAGTGAGAATAAGGAATTAGAAGACAAAATTGAGTCAACTCTGGAGCCAAAGGTGGAAGGTCTAGAGAAGATCCTGCACAAAGCTGATGATCTAAGGCTGAGAACATTGCAGGGCATTGTCAATATTCTGAGTCCACAACAGGCTATCCATTTCTTAATTGCTGCTGCAGAGCTTCACCTGAGGCTACATGAATGGGGCAAGAAGAAAGATGCCAAAAAGGCAAATTAA 816 0.4326 MSVPPSSALYLSQATEHSNFEGESFHKFFDCWISEQSQHLNDLLAAESNQVPSERAQALIEKVIDHYELYYKAKSRWAKHDVLAMLSPSWRSSLEEAFLWIGGWRPSMAFHLLYSKSSLQFEARLNELIQGIRTCDLGDLSAAQLSEFDDMQRRAIKEEREITDMMAKHQETVADAPMVELSHVVTEMIRANESGESENKELEDKIESTLEPKVEGLEKILHKADDLRLRTLQGIVNILSPQQAIHFLIAAAELHLRLHEWGKKKDAKKAN 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi258g00045 271 Pfam Seed dormancy control 39 115 IPR025422 GO:0006351|GO:0043565
Sebi258g00045 271 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 23 269 - -
Sebi258g00045 271 Coils Coil 185 205 - -
Sebi258g00045 271 ProSiteProfiles DOG1 domain profile. 22 268 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi258g00045 Sebi-Chr258 681424 682239 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi258g00045 24 258 Calmodulin-binding Proteins AT1G77920 26.360 6.79e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi258g00045 - - cam:101504084 398.282