Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi258g00034 ATGGGAGTGCTTTCAGGCAGTGTGCCATGGTACACCATGATGGTACTTGGCAAGAAGTTTTCAGTGTTTCAAAAGGTTGATGACACCCTTGCTGTGTTCCACACTCATGCTGTGGCTGGCCTTCTAGGTGGTGTCCTCACTGGCCTATTTGCTGAACCCCGTTTAAGTGCACTCTTTCTGCCCGTAACAAATTCCCAAGGAGGGGTCTATGGAGGCTCTGGTGGAGTCCAAATCCTTAAACAAATCGTGGGAGGTTTATTCATAGTTGGATGGAACCTTGTGGCTACTTCAATTATTTGTGTGGTTATAAAGTTGATTGTGCCACTGAGAATGACAGAGGAAGAGTTGGTAATTGGGGATGATGCAGTTCATGGGGAAGAAGCTTATGCTCTGTGGGGTGATGGAGAGAAACTTTCCCTCTACAAAGATGATACCACCCGCCATGGAATAATCGCCTCAAGTGGTGCCACTCAAGTGGTCTAA 483 0.47 MGVLSGSVPWYTMMVLGKKFSVFQKVDDTLAVFHTHAVAGLLGGVLTGLFAEPRLSALFLPVTNSQGGVYGGSGGVQILKQIVGGLFIVGWNLVATSIICVVIKLIVPLRMTEEELVIGDDAVHGEEAYALWGDGEKLSLYKDDTTRHGIIASSGATQVV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi258g00034 160 Gene3D Ammonium transporter AmtB like domains 1 132 IPR029020 -
Sebi258g00034 160 Pfam Ammonium Transporter Family 14 129 IPR024041 GO:0008519|GO:0016020|GO:0072488
Sebi258g00034 160 PANTHER AMMONIUM TRANSPORTER MEP2 1 138 IPR001905 GO:0008519|GO:0016020|GO:0072488
Sebi258g00034 160 SUPERFAMILY Ammonium transporter 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi258g00034 Sebi-Chr258 490259 490741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi258g00034 1 148 Inorganic Solute Cotransporters AT2G38290 61.486 9.15e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi258g00034 K03320 - gmx:100785993 273.863