Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi258g00024 ATGGCTTCTTCTATTGTTCGTAGGACCATCACCCACAAACTGAAGCTCCCATTTTCTTGTTCTTGGTGCTTGAATCATCACTTGGTGTCTCGCCATAGCTCAATCCACGCTGTTGAAGATGCCGTTTCCTTTCACAGCCAAGCCGTTGGGGGTGGTGGTGCAGGACTCCCATCTTATATGCGTGGAGCTGTGTATTGGGAACCCAACAAGCCTCTCACCATCGAGGAATTCCACATTCCTCGCCCCAAGGCCGGTGAAGTTCTCATCAAAACCAAAGCTTGTGGAGTATGCCACTCTGATCTGCATGTTTTGAAAGGTGAAATTCCATTTTCTAGTCCTTGCGTTTTGGGGCATGAGATTACTGGCGAAGTTGTTGAACATGGATCACTCTCTGATGGAAAAATCATAGAAAGGCTTCCTGTTGGATCTAGAGTTGTTGGGACCTTCATCATGCCTTGTGGCAACTGCTCATATTGTTCAAAGGGCCATGATGATCTGTGTGAAGCTTTCTTTGCTTATAACCGAGCAAAAGGAACCCTCTATGATGGTGAAACACGACTCTTTCTTCGAGGCAGTGGAAAGCCTGTATTCATGTATAGTATGGGAGGGCTTGCTGAATACTGTGTTGTGCCAGCAAATGCATTGACTGTATTACCAGACTCATTGCCATATACCGAGTCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTATGGTGCCATGGCTCATGCGGCTGAAGTGCGTCCGGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTTTGCAGATAGCTAGAGCATTTGGTGCTTCCGATATTATTGCTGTCGATGTCCAGGATGAAAAGCTACAGAAAGCGAAGAAATTTGGTGCTACTCACACTATAAATTCAGCAAAGGAGGATCCGATTGAGAAGATAATTGAAATTACCGGTGGAAAGGGTGTTGATGTTGCTGTGGAAGCCTTGGGGAAACCTCAGACATTTGCTCAATGCACACAAAGTGTGAAGGATGGAGGAAAAGCAGTGATGATTGGACTGGCACAAGCTGGTTCTTTAGGACAGGTGGACATAAATCGGCTTGTTCGTAGAAAGATACAAGTTATTGGCTCATATGGAGGCAGGGCAAGGCAAGATCTTCCCAAGTTAATTAGATTGGCAGAAACAGGTATCTTCAATCTTGACCATGCTGTTTCTAGAAGATACACCTTTGAGGAGGCAGGCAGAGCATTCCAAGATCTCAATGAAGGAAGCATTGTTGGTCGAGGTGTGATTGAGATATTATAG 1296 0.4529 MASSIVRRTITHKLKLPFSCSWCLNHHLVSRHSSIHAVEDAVSFHSQAVGGGGAGLPSYMRGAVYWEPNKPLTIEEFHIPRPKAGEVLIKTKACGVCHSDLHVLKGEIPFSSPCVLGHEITGEVVEHGSLSDGKIIERLPVGSRVVGTFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRGSGKPVFMYSMGGLAEYCVVPANALTVLPDSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLQKAKKFGATHTINSAKEDPIEKIIEITGGKGVDVAVEALGKPQTFAQCTQSVKDGGKAVMIGLAQAGSLGQVDINRLVRRKIQVIGSYGGRARQDLPKLIRLAETGIFNLDHAVSRRYTFEEAGRAFQDLNEGSIVGRGVIEIL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi258g00024 431 Gene3D - 237 374 - -
Sebi258g00024 431 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 222 395 IPR036291 -
Sebi258g00024 431 Pfam Alcohol dehydrogenase GroES-like domain 85 215 IPR013154 -
Sebi258g00024 431 SUPERFAMILY GroES-like 55 263 IPR011032 -
Sebi258g00024 431 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 117 131 IPR002328 GO:0008270|GO:0016491
Sebi258g00024 431 FunFam Sorbitol dehydrogenase 237 375 - -
Sebi258g00024 431 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 59 428 - -
Sebi258g00024 431 FunFam Alcohol dehydrogenase (Zinc) 64 249 - -
Sebi258g00024 431 Pfam Zinc-binding dehydrogenase 260 391 IPR013149 -
Sebi258g00024 431 CDD Zn_ADH10 60 429 - -
Sebi258g00024 431 Gene3D - 64 420 - -
Sebi258g00024 431 SMART PKS_ER_names_mod 67 428 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi258g00024 Sebi-Chr258 342652 346876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi258g00024 74 381 Monolignol Biosynthesis Gene Families AT4G37990 26.603 1.90e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi258g00024 - - gmx:100775182 729.554