Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi258g00004 ATGAAAAAAGAAGTGCAGGTGACAAACGAGGTGTTTAGATACGCCAAGAAGGCAGGAGCGAGTTACATTAACAAGCCTAAAATGCGACACTACGTTCATTGCTATGCGTTGCATATTCTTGACGAGGAGGCATCGAATGAACTGAGAAGGGGTTTGAAGGAGAGAGGGGAGAACGTTGGGGCGTGGAGGCAAGCATGTTACAAACCGCTTGTGGCTATAGCAGGGCTTCAAGGTTGGGACATTGATGCCATATTCAATGCAGATCCTCGACTTTCTATATGGTATGTGCCAACTAAACTCCGTCAGCTTTGTCACGCCGAGAGGAACAACAACGCTGCTTCAAGCTCTGTCTCTGTCGGCAGCGCCCACCTTCCTTTTTAA 381 0.4803 MKKEVQVTNEVFRYAKKAGASYINKPKMRHYVHCYALHILDEEASNELRRGLKERGENVGAWRQACYKPLVAIAGLQGWDIDAIFNADPRLSIWYVPTKLRQLCHAERNNNAASSSVSVGSAHLPF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi258g00004 126 PANTHER PROTEIN LEAFY 4 125 IPR002910 GO:0003677|GO:0006355
Sebi258g00004 126 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 4 112 IPR035209 GO:0003677
Sebi258g00004 126 Gene3D Protein LEAFY 1 118 IPR038276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi258g00004 Sebi-Chr258 54192 54572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi258g00004 2 121 Orphan Transcription Factor Family AT5G61850 78.333 2.74e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Sebi258g00004 C_LFY_FLO 4.5e-63 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi258g00004 - - gmx:100798196 224.942