Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi257g00078 ATGGGTAACGTCGAGGACTATGCGTACCCTTCAGCCATGAACGTTGAGGAGAGCGCACACCGTGTGGCGGTTCCACCGCCTCAGCCGTTTTTCAAGTCACTAAAGTACTCTCTGAAGGAGACTTTTTTTCCAGATGACCCTTTGAGGCGGTTTAAGAACCAACCAGCCTCCAAGAAGTTTGTGCTAGGCCTTCAGTACTTCTTCCCAATCTTCGAGTGGGCACCAAACTACACCTTTCAGTTCTTGAAATCCGACCTCATAGCTGGCATCACCATCGCTAGCTTGGCTATTCCTCAAGGCATCAGCTATGCCAAGCTCGCCAACTTGCCTCCAATTCTTGGACTATATTCTAGCTTTATACCACCGTTGATTTATGCGATGATGGGTAGCTCAAGGGATTTGGCAGTGGGGACTGTGGCCGTTGGATCTCTTCTCATGGGTTCCATGTTGGCGAATGAGGTGAATCCCAACCAAAACCCAAAGCTTTTCCTCCACCTTGCTTTCACAGCTACCTTCTTTGCTGGAATTTTGCAGGCTGCATTGGGTTTGTTCAGGTTAGGGTTTATCGTGGATTTCCTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACAGTGGTTTGTCTGCAGCAGCTAAAATCGATTCTTGGCCTTGAGCATTTCACTCATGCGGCTGATCTCGTCTCAGTCATGCGCTCTGTTTTTACTCAAATTCACGAGTGGAGGTGGGAAAGCGCCGTGTTAGGATGTTGCTTCATTTTCTTCCTCCTTATCACAAGATACTTCAGCAAAAAACAACCGAAGTATTTTTGGGTGTCAGCGATGGCGCCGTTGACGTCCGTTATATTGGGAAGTCTCCTGGTTTATTTCACTCACGCTGAGAATCACGGCGTTCAAGTGATAGGAAATTTGAAGAAGGGGCTAAATCCACTATCTCTCACAGATTTGGTATTTGTGTCGCCTTATATGAACACGGCTATCAAGACAGGCCTTGTTGTTGGCATTATAGCACTAGCGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAAAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCTCGTTCAGCCGTGAACTATAATGCTGGATGCAAGACTGCAGCATCCAACATTGTGATGTCAATTGCAGTCATGTTGACATTGTTATTCCTAACACCTTTGTTCTATTACACTCCTCTGGTGGTGCTATCAGCCATAATCGTATCTGCAATGCTTGGCCTCATAGATTATCAAGCAGCCATCCATCTGTGGAAGATTGACAAATTTGATTTTGTCGTGTGCATGAGTGCATATATTGGCGTGGTCTTTGGCAGTGTTGAAATTGGCTTAGTTATAGCTGTTGCAATATCTGTACTTCGGATACTACTATTTGTTGCAAGGCCAAGGACATTTGTTTTGGGCAACATTCCAAATTCTGTAGTATACAGAAATGTTGAGCAATATCCAAATGCAAAACATGTTCCTGGAATCCTAATTCTAGAGATTGATGCACCATTTTACTTTGCCAATTCAAACTATTTAAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGAATTAAAGCTACAGGGGAAACATGTTTGCAGTATGTTATAATGGATATGAGTGTTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGGTCAAGAAAGTTGCAGATAGAAGAGGGCTACAACTTGTTTTGGTCAATCCTGGAAGCGAGGTGATGAAGAAACTAAACAAAGCTAACTTCCAAAAGGATATAGGGCAAAAATGGATCTATCTTACAGTTGAAGAGGCTGTTGGAGCATGCAACTTTATGCTCCATTCATGCAAAACGAATCTCAATAAAGATGGATCAGGGGGTTGGAACAACGTCTGA 1977 0.4375 MGNVEDYAYPSAMNVEESAHRVAVPPPQPFFKSLKYSLKETFFPDDPLRRFKNQPASKKFVLGLQYFFPIFEWAPNYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLANEVNPNQNPKLFLHLAFTATFFAGILQAALGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHAADLVSVMRSVFTQIHEWRWESAVLGCCFIFFLLITRYFSKKQPKYFWVSAMAPLTSVILGSLLVYFTHAENHGVQVIGNLKKGLNPLSLTDLVFVSPYMNTAIKTGLVVGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFYYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFVVCMSAYIGVVFGSVEIGLVIAVAISVLRILLFVARPRTFVLGNIPNSVVYRNVEQYPNAKHVPGILILEIDAPFYFANSNYLRERITRWIDEEEDRIKATGETCLQYVIMDMSVVGNIDTSGISMLEEVKKVADRRGLQLVLVNPGSEVMKKLNKANFQKDIGQKWIYLTVEEAVGACNFMLHSCKTNLNKDGSGGWNNV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi257g00078 658 SUPERFAMILY SpoIIaa-like 515 636 IPR036513 -
Sebi257g00078 658 FunFam Sulfate transporter 31 493 639 - -
Sebi257g00078 658 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Sebi257g00078 658 Pfam STAS domain 514 632 IPR002645 -
Sebi257g00078 658 Gene3D STAS domain 493 638 IPR036513 -
Sebi257g00078 658 PANTHER SULFATE TRANSPORTER 31 643 IPR001902 GO:0016020|GO:0055085
Sebi257g00078 658 ProSiteProfiles STAS domain profile. 513 636 IPR002645 -
Sebi257g00078 658 CDD STAS_SulP_like_sulfate_transporter 514 629 - -
Sebi257g00078 658 Pfam Sulfate permease family 82 462 IPR011547 GO:0016020
Sebi257g00078 658 NCBIfam sulfate permease 69 632 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi257g00078 Sebi-Chr257 1250743 1256555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi257g00078 20 646 Inorganic Solute Cotransporters AT4G02700 68.631 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi257g00078 K17471 - gmx:100791091 1149.81