Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi257g00050 ATGAAGCAACATTGTGTATATGACTTCAAATGGATCTTTGTCTATCTAGTTCTTTTTCCGTCTTTGGTTTTTGGTGATTGTACATGTGAACCAGAGGATAACTCTGGTGACAAAAGCTTGGCTCGGAAATACAAAATAGCATCTCTTGTTATAATTTTGGTTGCAAGTGCATTAGGTGTAACAATTCCAATACTTGGGAAAACTTTCTCAGCATTACGACCTGAGAAGGACTTTTTCTTCATCATCAAAGCCTTTGCAGCAGGGGTTATATTGTCCACTGGTTTCATCCATGTATTGCCTGATGCTTTTGAGAAATTGACATCTCCTTGTCTTAGTGATCATCCATGGGGAGATTTTCCATTCACAGGATTTATGGCAATGTTATCCGCTATGGGAACACTTATGATTGATTCTTTTGCAACTGCATATTTTACTAAGTCTCACTTTAATGACAAGGGTCAAGTTGTAGACGAAGAAAAGGTGGAGGTTCAAAATCATACCCATGGTCATGCTCATGGTTCGATTTCATCTAGTTCAAAAGATCTCATTCGTCGTCGTGTTATTTCTCAGGTGCATCTGAGAGTCCTGAGGGCTGAGACGATAAAACCTCTTATTGCAGCTTTAACATTCCATCAATTTTTTGAATGCATGGGGCTTGGTGGTTCCATCTCACAGGCAAAATTCAAGAACAAAGCAATTACAATTATGGTATTATTCTTTTCATTGACAACACCAGTAGGAATTGCAATTGGGATAGGGATTACAAATGCTTACAATGAGAATAGCCCAACTGCACTCATTGTGGAGGGAATTCTTAATGGAGAATCTGCTGGGATCTTGATTTACACGTCTCTTGTGGACTTTCTTGCGGCCGATTTTATGAGTCCAAAAGTCCAAGAAAGTGGTAGGCTTCAAATAGGAGTTAACGTGTCTCTTCTTCTCGGAGCTGGATGTATGTCACTTTTAGCTAAATGGGCCTAA 981 0.3935 MKQHCVYDFKWIFVYLVLFPSLVFGDCTCEPEDNSGDKSLARKYKIASLVIILVASALGVTIPILGKTFSALRPEKDFFFIIKAFAAGVILSTGFIHVLPDAFEKLTSPCLSDHPWGDFPFTGFMAMLSAMGTLMIDSFATAYFTKSHFNDKGQVVDEEKVEVQNHTHGHAHGSISSSSKDLIRRRVISQVHLRVLRAETIKPLIAALTFHQFFECMGLGGSISQAKFKNKAITIMVLFFSLTTPVGIAIGIGITNAYNENSPTALIVEGILNGESAGILIYTSLVDFLAADFMSPKVQESGRLQIGVNVSLLLGAGCMSLLAKWA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi257g00050 326 NCBIfam ZIP zinc/iron transport family 27 326 IPR004698 GO:0005385|GO:0016020|GO:0071577
Sebi257g00050 326 PANTHER ZINC/IRON TRANSPORTER 41 320 - -
Sebi257g00050 326 Pfam ZIP Zinc transporter 44 181 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Sebi257g00050 326 Pfam ZIP Zinc transporter 199 323 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi257g00050 Sebi-Chr257 640985 643327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi257g00050 26 326 Inorganic Solute Cotransporters AT3G12750 51.818 8.63e-109 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi257g00050 K14709 - qsa:O6P43_020675 427.557