Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi256g00048 ATGGCTTCAAGACCCATTGTTCCACAACAGCCCAGAGGTGACGCAGCCTTGGGGGCAGGGAAGCAGCAGAAGAAGAACGGTGCAGCAGATGGAAGGAACCGTAAAGCACTTGGTGATATTGGAAACTTGGTCACTGTAAGAGGAGTTGAGGTCAAGCCTAATCGTCCCATCACAAGGAGTTTCTGTGCCCAACTACTTGCCAATGCACAAGCTGCAGCTGCTGCTGAAAATAACAAGAAACAGGCTTGTCCCAATGTGGCTGGGCCTCCTCCTGTTGTTGAAGGAGTTGCAGTGGCTAAAAGAGTGGCCCCCAAACCAGGTCAGAAGAAAGTCACAACAAAACCAAAGCCTGAGGAAGTCATTGAAATAAGTCCAGACGATGCCAACTCCAAGAAGAAATCACACACTTATTCTTCTGTGCTCACAGCTCGAAGCAAGGCAGCATGTGGTTTGACTAATAAACCTAAAGAGATTATTGACATTGATGCTGCTGACACTGGCAATGAGCTTGCTGCTGTGGAATATATTGAAGACATTTACAAGTTCTATAAGATGGTTGAGAATGAAAGCCGTCCCCATGACTACATGGACTCACAACCTGAGATCAATGAGAGGATGAGAGCTATACTTGTTGATTGGCTGATAGATGTACACAGCAAATTTGACCTTTCACTTGAAACCCTTTATTTGACCATCAACATAGTTGATAGATTCCTAGCAGTTAAGACTGTGCCAAGAAGGGAACTGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGCCCCCAGAGGTTAATGACTTTGTCTGCCTCTCAGACAGAGCTTACACTCATGAACAGATACTTTTCATGGAGAAAATCATATTGGGGAAGCTAGAATGGACCTTGACTGTGCCTACCCCTTTTGTTTTCCTAGTTCGTTTTATCAAGGCATCAGTGCCAGATGAGGCATTGGAAAACATGGCACATTTCCTTTCTGAATTGGGGATGATGCATTATGCCACCTTAATGTATTGTCCATCAATGGTTGCTGCCTCAGCAGTCTATGCTGCTAGATGCACTCTGAATAAGAGCCCTATTTGGAATGAGACACTTAAGCAGCACACTGGTTACTCTGAAGAGCAACTTATGGATTGTGCTAGACTACTGGTGAGCTTGCACTCCACAGTTGGGAATGGGAAGCTTAAGGTTGTGCATAGAAAGTACTCTGATCCTGAGAGAGGATCTGTTGCAGTGCTTCCACCAGCTAAAAATCTTCTGTCTGAAGGGAAGAGCCTCTAA 1299 0.4519 MASRPIVPQQPRGDAALGAGKQQKKNGAADGRNRKALGDIGNLVTVRGVEVKPNRPITRSFCAQLLANAQAAAAAENNKKQACPNVAGPPPVVEGVAVAKRVAPKPGQKKVTTKPKPEEVIEISPDDANSKKKSHTYSSVLTARSKAACGLTNKPKEIIDIDAADTGNELAAVEYIEDIYKFYKMVENESRPHDYMDSQPEINERMRAILVDWLIDVHSKFDLSLETLYLTINIVDRFLAVKTVPRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILFMEKIILGKLEWTLTVPTPFVFLVRFIKASVPDEALENMAHFLSELGMMHYATLMYCPSMVAASAVYAARCTLNKSPIWNETLKQHTGYSEEQLMDCARLLVSLHSTVGNGKLKVVHRKYSDPERGSVAVLPPAKNLLSEGKSL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi256g00048 432 CDD CYCLIN_AtCycB-like_rpt1 158 300 - -
Sebi256g00048 432 FunFam G2/mitotic-specific cyclin 191 298 - -
Sebi256g00048 432 SUPERFAMILY Cyclin-like 168 302 IPR036915 -
Sebi256g00048 432 SUPERFAMILY Cyclin-like 304 423 IPR036915 -
Sebi256g00048 432 Gene3D - 192 303 - -
Sebi256g00048 432 Pfam Cyclin, N-terminal domain 178 302 IPR006671 -
Sebi256g00048 432 Pfam Cyclin, C-terminal domain 305 421 IPR004367 -
Sebi256g00048 432 Gene3D - 178 417 - -
Sebi256g00048 432 PIRSF Cyclin_A_B_D_E 1 432 IPR046965 GO:0016538|GO:0044772
Sebi256g00048 432 PANTHER CYCLINS 132 410 IPR039361 -
Sebi256g00048 432 SMART Cyclin_C_2 305 422 IPR004367 -
Sebi256g00048 432 ProSitePatterns Cyclins signature. 207 238 IPR006671 -
Sebi256g00048 432 SMART cyclin_7 309 391 IPR013763 -
Sebi256g00048 432 SMART cyclin_7 212 296 IPR013763 -
Sebi256g00048 432 CDD CYCLIN_AtCycB-like_rpt2 305 421 - -
Sebi256g00048 432 MobiDBLite consensus disorder prediction 1 35 - -
Sebi256g00048 432 FunFam G2/mitotic-specific cyclin-1 299 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi256g00048 Sebi-Chr256 927855 930002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi256g00048 1 431 Core Cell Cycle Gene Families AT4G37490 55.628 2.53e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi256g00048 K21777 - gmx:547919 676.396