Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi256g00029 ATGGCATCCAGCTCAATGTCAGCCTCTGGCTCATGGAGTGTTAAGGACAATAAAGCCTTTGAAAAGGCTCTAGCTGTTTATGACAAGGACACCCCAGACCGTTGGTACAATGTTGCCCATGCTGTTGGTGGGAAAACTCCAGAGGAAGTGAAGAGGCACTATGAGCTCCTTGTCCGGGATGTTAAGCATATTGAGTCAGGGCAAGTGCCATTCCCAAATTACAAGAAAACTGGAGTCTCTGAAGATCATAAGGAGAAAAGGCTGAAGAACCTGAATCTCCAGTAA 285 0.4632 MASSSMSASGSWSVKDNKAFEKALAVYDKDTPDRWYNVAHAVGGKTPEEVKRHYELLVRDVKHIESGQVPFPNYKKTGVSEDHKEKRLKNLNLQ 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi256g00029 94 CDD SANT 18 58 IPR001005 -
Sebi256g00029 94 FunFam Transcription factor SRM1 4 71 - -
Sebi256g00029 94 Gene3D - 2 71 - -
Sebi256g00029 94 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Sebi256g00029 94 SMART sant 8 60 IPR001005 -
Sebi256g00029 94 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Sebi256g00029 94 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 86 IPR044636 GO:0003700
Sebi256g00029 94 MobiDBLite consensus disorder prediction 72 94 - -
Sebi256g00029 94 MobiDBLite consensus disorder prediction 77 94 - -
Sebi256g00029 94 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Sebi256g00029 94 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi256g00029 Sebi-Chr256 563503 564135 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi256g00029 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi256g00029 - - gmx:100818368 168.318