Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi256g00021 ATGGACAACCCTGACCTTTTCCAATTCCTCACCACCAACAACAACAACGACGCCTCCTTCTTCAACGCAACCGCCATGATGCAACACAGCTTCTGTAGTTCCTCCAATTATTACCCCTTGGAACTCTCCGAAATTACCGATACACCCTCCCACCATGATAGGGCTCTCGCTGCTATGAGAAACCACAAGGAAGCTGAGAAGCGAAGAAGAGAGAGAATCAATTCCCACCTCGACCACCTTCGCACTCTCCTTCCTTGTAATTCCAAGACGGATAAGGCTTCACTTCTTGCGAAAGTGGTTCAGCGTGTGAAGGAGTTGAAGCAGCAAACCTCTGAAATCACTGAACTCGAAACGGTTCCTTCAGAAACCGATGAAATCACCGTCCTCTCCACCGGCGGCGACCATGCCGGCGGTGATGGGAGGCTCATATTCAAGGCTTCTTTGTGCTGTGAGGACCGTTCTGATCTCATCACTGACATCATAGAAATCCTCAAGTCTCTTCATCTGAAAACTCTCAAAGCTGAAATGGCCACGCTTGGAGGAAGAACTCGTAACGTTCTGCTGGTTGCTGCTGATAAAGAACACAGCATTGAATCAATCCATTTCCTTCAGAACTCACTCAAATCCTTGATAGATCGAAACAATTCCAGTGACAGGTCAAAACGACGCCGTGGGTTAGATCGAAGAATGATGGCTTAG 699 0.4793 MDNPDLFQFLTTNNNNDASFFNATAMMQHSFCSSSNYYPLELSEITDTPSHHDRALAAMRNHKEAEKRRRERINSHLDHLRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELETVPSETDEITVLSTGGDHAGGDGRLIFKASLCCEDRSDLITDIIEILKSLHLKTLKAEMATLGGRTRNVLLVAADKEHSIESIHFLQNSLKSLIDRNNSSDRSKRRRGLDRRMMA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi256g00021 232 PANTHER TRANSCRIPTION FACTOR BHLH30 36 225 IPR045847 GO:0003700|GO:0006355
Sebi256g00021 232 FunFam transcription factor bHLH30 52 115 - -
Sebi256g00021 232 Gene3D - 52 118 IPR036638 GO:0046983
Sebi256g00021 232 CDD bHLH_AtAIG1_like 53 128 - -
Sebi256g00021 232 MobiDBLite consensus disorder prediction 214 232 - -
Sebi256g00021 232 Pfam Helix-loop-helix DNA-binding domain 61 106 IPR011598 GO:0046983
Sebi256g00021 232 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 57 106 IPR011598 GO:0046983
Sebi256g00021 232 SMART finulus 63 112 IPR011598 GO:0046983
Sebi256g00021 232 MobiDBLite consensus disorder prediction 213 232 - -
Sebi256g00021 232 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 114 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi256g00021 Sebi-Chr256 371674 372646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi256g00021 6 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 60.633 5.67e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi256g00021 HLH 1.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi256g00021 - - gmx:100802566 330.872