Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi255g00092 ATGTCTATGATGTTCAAGATTGTTGCAGATGCCCTTAATAAAGCAGGTCTCTCTGATCGGTATCATCCACAAGATTATCTCAATTTTTACTGCCTTGGAAAGAGAGAACCTCAATCCCCAGAATGTCAGTCATCACAAAATCAATCATCTGAAAACCGTGGCTTGGCATCAGCCAAGAAATTCAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATGAATACGTAATCATTGGATCAGCAAATATTAACCAGAGATCATTGGATGGTTCAAGGGATACAGAAATAGCTATGGGTGCTTATCAACCAAAATATACATGGACAGAAAAGAAATCTCATCCACTTGGCCAGGTGTATGGATACCGGATGTCACTGTGGGCTGAGCACCTTGGTAGTCTTGATGGTATTTTTACTGAACCTCACACCCTGGAATGTGTTAGACATGTCAACAAGATTGCTAGACAAAACTGGGAAACATTTGTGGCTGAGGAATGGAATCAGATGAGGGGACACTTGTTGCAGTATCCAGTTTATGTCAGCAGGGATGGAAAAGTCAGTGCACTGAATGGTTGTGAGTGCTTTCCTGATGTTGGAGGCAAAATTCTTGGATCACCCAATTCACTTCCGGATGCACTAACTACTTGA 657 0.4125 MSMMFKIVADALNKAGLSDRYHPQDYLNFYCLGKREPQSPECQSSQNQSSENRGLASAKKFRRFMIYVHAKGMIVDDEYVIIGSANINQRSLDGSRDTEIAMGAYQPKYTWTEKKSHPLGQVYGYRMSLWAEHLGSLDGIFTEPHTLECVRHVNKIARQNWETFVAEEWNQMRGHLLQYPVYVSRDGKVSALNGCECFPDVGGKILGSPNSLPDALTT 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi255g00092 218 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 64 91 IPR001736 GO:0003824
Sebi255g00092 218 Pfam Phospholipase D C terminal 140 208 IPR024632 -
Sebi255g00092 218 Pfam Phospholipase D Active site motif 65 91 IPR001736 GO:0003824
Sebi255g00092 218 SMART pld_4 64 91 IPR001736 GO:0003824
Sebi255g00092 218 SUPERFAMILY Phospholipase D/nuclease 60 136 - -
Sebi255g00092 218 Gene3D Endonuclease Chain A 18 116 - -
Sebi255g00092 218 PANTHER PHOSPHOLIPASE D 1 207 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi255g00092 Sebi-Chr255 999515 1000770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi255g00092 1 217 Phospholipase D Gene Family (Wang group) AT4G00240 58.257 5.29e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi255g00092 K01115 - gmx:100779740 360.533