Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi255g00090 ATGGAGAAGTACGAGCTAGAGAAGCAGGTAGGACATGTGGATCACACCGTGGTAAAGGTCATGCGCCATAAACAGACCAAAGGCCTTGTTGCCGTCAAATACATTCCACGGGGCAATAAGATTGATGAGAGGCTGAAGAGAGAAATCATAAACCATAGATCTCTTCACCATCCGAATATTATTGCCTTCAAGGAGTTGGTTTTGACTCCAACACACATTGCAATAGTCATGGAGTATGCATCGGGTGGAGATCTGTATGACCATCTTTGTAATGTATGCTTATGTGAAAATGAGGTTCGGTATTTCTTTCAGCAGTTAATTTCAGGAGTTAGTTATTGTCATGACATGGAAATATGTCACCGAGATTTGAAGTTGGAGAACACTTTATTGGAGGGCAAATGTCTTAAAATTTGTGATTTCGGCTACTCTAAGTCATATCTAATTCACTCAAGGGCTAATTCAATGATTGGAACTCCAGCTTATATTGCACCAGAGATTTTTTCTGACAAAGAATATGATGGAAAGTTGGCAGATATATGGTCCTGTGGGGTGATACTTTATGTGATGCTGGTGGGATCATTGCCATTTGATGACCCAGAGGATCGCTGCAATTTAAGAAAAACAATAAAACGAATTATGGATGTTCAATACAAGATCCCAGACGATGTTTACATATCTCAAGGCTGTAGAAATCTGATATCTCGCATTTTTGTGGCAGATCCAAAAAAGAGAATTACCATGAAGGAAATTAAGTCCCACCCATGGTTTTTAAATAACTTGCCTAAGGAATTGACAGAAGAGGCTCAAACTCTTCACTACAGATCAAAAGAAAACTCAAGCTCTGCTCAAAGTATAGAAGACATCATGAAAATTATTTACCAGGCCAAAACTCTACCTGCACCTGCTTCCAGTGTTAACCGGGCCAAAACTATACCTTCAACTTCAGGTCCAATTCTATTAGAGGATTTTAGCTTGAGGTGTAGAATAAGTAACTAG 996 0.3926 MEKYELEKQVGHVDHTVVKVMRHKQTKGLVAVKYIPRGNKIDERLKREIINHRSLHHPNIIAFKELVLTPTHIAIVMEYASGGDLYDHLCNVCLCENEVRYFFQQLISGVSYCHDMEICHRDLKLENTLLEGKCLKICDFGYSKSYLIHSRANSMIGTPAYIAPEIFSDKEYDGKLADIWSCGVILYVMLVGSLPFDDPEDRCNLRKTIKRIMDVQYKIPDDVYISQGCRNLISRIFVADPKKRITMKEIKSHPWFLNNLPKELTEEAQTLHYRSKENSSSAQSIEDIMKIIYQAKTLPAPASSVNRAKTIPSTSGPILLEDFSLRCRISN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi255g00090 331 SUPERFAMILY Protein kinase-like (PK-like) 1 310 IPR011009 -
Sebi255g00090 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
Sebi255g00090 331 SMART serkin_6 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi255g00090 331 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi255g00090 331 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Sebi255g00090 331 FunFam Serine/threonine-protein kinase SRK2A 80 264 - -
Sebi255g00090 331 Gene3D Transferase(Phosphotransferase) domain 1 80 264 - -
Sebi255g00090 331 ProSiteProfiles Protein kinase domain profile. 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi255g00090 331 PANTHER SERINE/THREONINE KINASE 2 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi255g00090 Sebi-Chr255 974275 976741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi255g00090 4 256 CBL-interacting serine-threonine protein kinases AT1G01140 39.544 5.23e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Sebi255g00090 Pkinase 3.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi255g00090 K14498 - vvi:100259302 427.172