Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi255g00068 ATGCCTGTCATCACTCCTAATAGGCGTCCTCCTGGTATTGCAACTTTCTTCAATCCAATAGACATGGCATTGCTGTCAGCTGTAAAAGCTGGTATTTTTGTAGTGCAAGCTGCTGGAAATACTGGACCATCACCTATGAGCATGTCCTCTTTTAGTCCATGGATCTTTACTATTGGTGCCACCTCTCATGATCGAGCTTATAGCAACTCTCTATTACTTGGAAATAATTTGACCATACTTGGAGTTGGACTTGCACCTGGCACAGATGAGAACACACTGTATAAATTGATTCATGCAAAGCATGCTTTGAACAATGATGAAACAACGGTTGCTGATGATATGTATGTTGGTGAGTGCCTAGATGCAAGTAAACTCGATCAGGATTTGGTCCAGGGCAACCTCCTGATCTGTAGCTATTCAATCCGATTTGTGCTTGGACTCTCCAGCATCAAACAGGCCTTAGAAACAGCCAAGAACCTTAGTGCAGTTGGTGTTATTTTTCCCATGGATCCTTTTGTGACTGGTTTTCAGCTTAATCCAATTCCAATGAAAATACCCGCTCCTGGAAATTTTATATGGGCTGCTTGGAGTTCTCTTGCCACTGATTCAGCTGAATTTCTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCACTAGTTAAGCAAAAGTTTCCCAATTTCAGTCCAGCAGCCATTGGATCTGTGCTTTCCACCACAGCTTCTCTGTATGACAACAATGGGAAGCCAATAATGTCTCAGCGATCCTATGCCTCCCCAGACCTAAACCAATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTGAATGCTACTGCAGCATTAATCCGGGATTGCTTTTTGATTCTAGTAAGTTATGATGATTACATGTCATTTCTATGTGCTATCAATGGTTCAGCTCCTGTATTGCTAAACTACACTGGTCAGAACTGTTGGATGTATAATTCTACTGTATATGGCTCTGATCTGAACTTGCCCTCAATCACAATAGCAAATTTGAACCAATCTAGAGTAGTACAAAGAACAGTCCAAAACATTGCTGGAAATGAAACTTACAGTGTTGGTTGGAGTTCTCCATATGGGTTTCAGTGA 1146 0.4223 MPVITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTIGATSHDRAYSNSLLLGNNLTILGVGLAPGTDENTLYKLIHAKHALNNDETTVADDMYVGECLDASKLDQDLVQGNLLICSYSIRFVLGLSSIKQALETAKNLSAVGVIFPMDPFVTGFQLNPIPMKIPAPGNFIWAAWSSLATDSAEFLGENFAMMSGTSMAAPHVAGLAALVKQKFPNFSPAAIGSVLSTTASLYDNNGKPIMSQRSYASPDLNQSPATPFDMGSGFVNATAALIRDCFLILVSYDDYMSFLCAINGSAPVLLNYTGQNCWMYNSTVYGSDLNLPSITIANLNQSRVVQRTVQNIAGNETYSVGWSSPYGFQ 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi255g00068 381 CDD PA_subtilisin_like 70 187 - -
Sebi255g00068 381 Gene3D - 311 381 - -
Sebi255g00068 381 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 168 IPR045051 -
Sebi255g00068 381 Gene3D - 64 166 - -
Sebi255g00068 381 ProSiteProfiles Serine proteases, subtilase domain profile. 1 293 - -
Sebi255g00068 381 SUPERFAMILY Subtilisin-like 15 293 IPR036852 GO:0004252|GO:0006508
Sebi255g00068 381 ProSitePatterns Serine proteases, subtilase family, serine active site. 216 226 IPR023828 -
Sebi255g00068 381 Gene3D Peptidase S8/S53 domain 15 63 IPR036852 GO:0004252|GO:0006508
Sebi255g00068 381 Gene3D Peptidase S8/S53 domain 184 293 IPR036852 GO:0004252|GO:0006508
Sebi255g00068 381 Pfam Subtilase family 20 258 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi255g00068 Sebi-Chr255 736644 739332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi255g00068 4 187 Subtilisin-like Serine Gene Family AT5G44530 72.826 6.92e-89 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi255g00068 - - ini:109174119 417.542