Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi255g00064 ATGAAACAGTTGAAATTGGCTGCAGAATCTCACGCCAAAGAGGATAATCCCTCTAGGCACAAACCAGAAATGGAAAAAGCTCTTGAATCTTGTGACAGTCCAAGAAATAGAAAGATAACAGCTAGATGGGATCCAGAAAGAGCATGTCGGCCTATAATTGATAAAGCACCCGTGTTTCATCCGACTGCTGAGGAGTTTGAAGACACACTTGGTTACATAGCTAAGATACGTCCCATGGCTGAACCTTATGGCATATGTAGGATTGTCCCTCCACCTTTCTGGATTCCACCTTGTCCACTTAAGGAGAAAGGTGTATGGGAAACAGCTAAGTTTCCCACTCGCATTCAACAAATTGATTTGCTTCAGAATAGGGAGCCCATGAGAAAGAAAAGTAGGGGAAGGAAACGAAAACGTAGAAGGCAATCAAAGATGGGAGCATATAGGAAAACTGCCAATTCAGGTTCTGCAGCTAATGTTGCTAATGAACCTGATGAGAAGAAGTTTGGATTCCGATCAGGGTCAGACTTCACACTTCAAAACTTTCAGAAATATGCTAATTTTTTCAAAGATTGCTACTTTGGGTTGAATGATGCCAATGAAGATAGAAAAGGTAGTGATAATAATCACCTGAAGACAAGGGAGCTCTCTGTGGAGGAGATTGAAGGCGAATACTGGAGAATAATAGAGGAACCAACTGATGAAGTTGAGGTGTATTATGGAGCTGACTTGCAAACTGGAGAACTTCGAAGTGGTTTTCCTAAGGCATCCTCAACTACAGGTGATTCAGATCGATCTTTATACTTTCCTATAAAGACTAACACCTTGTTCTCATTTACTGCTCCTTGGAACAGCATGTTGAAGATCACCACCTGTATTCACTCAATTATCTGCACTGGGGTGACCCAAAAGTATGGTATGGTGTACCTGGGAGCCATGCTTCTGGTTTGGAAGATGCAATGA 960 0.4198 MKQLKLAAESHAKEDNPSRHKPEMEKALESCDSPRNRKITARWDPERACRPIIDKAPVFHPTAEEFEDTLGYIAKIRPMAEPYGICRIVPPPFWIPPCPLKEKGVWETAKFPTRIQQIDLLQNREPMRKKSRGRKRKRRRQSKMGAYRKTANSGSAANVANEPDEKKFGFRSGSDFTLQNFQKYANFFKDCYFGLNDANEDRKGSDNNHLKTRELSVEEIEGEYWRIIEEPTDEVEVYYGADLQTGELRSGFPKASSTTGDSDRSLYFPIKTNTLFSFTAPWNSMLKITTCIHSIICTGVTQKYGMVYLGAMLLVWKMQ 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi255g00064 319 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Sebi255g00064 319 MobiDBLite consensus disorder prediction 121 160 - -
Sebi255g00064 319 Pfam jmjN domain 57 90 IPR003349 -
Sebi255g00064 319 SMART JmjN_1 55 96 IPR003349 -
Sebi255g00064 319 PANTHER LYSINE-SPECIFIC DEMETHYLASE 51 276 - -
Sebi255g00064 319 MobiDBLite consensus disorder prediction 1 39 - -
Sebi255g00064 319 MobiDBLite consensus disorder prediction 128 145 - -
Sebi255g00064 319 Gene3D Cupin 41 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi255g00064 Sebi-Chr255 699747 702927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi255g00064 9 267 JUMONJI Transcription Factor Family AT1G30810 55.682 3.22e-74 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sebi255g00064 JmjN 2e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi255g00064 K11446 - gmx:100784581 399.438