Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi253g00126 ATGGGCTGTGTCCATGGCAAGTGTTGCTGCGGCAATTCTTCATCAGATGATGGCTCTAGGAACTACCGAGAAATTGGCTTCCGTAGGAAGAACGTAATTGCTCAGAGATCACTGAAGCATGTTGCTGTTCCTTCCCACAACTTCATTTTGGAATACACTTTTCTCACACAGCGGGGATACTACCCTGACTCACCGGATAAAGAAAACCAAGATAGTTTCTGCATTAGGACACAAGTCCAAGGTAACCCCAGTATCCATTTCTTCGGTGTCTATGATGGGCATGGTCAATTTGGTAGCCAGTGTTCCAACTTTGTTAAGGATAGGTTGGTAGAAAAATTATCAAACGACCCTGCATTGGTGGAGGACCCTGTCCAGGCTTACTCTTCTGCATTCTTGACAACAAATCAAGAATTGCATAGTAGTGAGATTGATGATTCTATGAGTGGCACTACCGCAATTACGGTGCTTGTTATTGGAGACACCCTATATGTTGCTAATGTTGGTGATTCAAGAGCTGTGCTAGCTGTTAAGGATGGTAATCGCATCGTTGCTGAGGACTTGTCCTCTGATCAGACACCATTTCGGAGAGATGAATATGAGAGAGTGAAACTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGATCAGGGATCCAAATATCCAGCATTGGGGTGATGAAGAGAGTCGGGGCGGTGATCCTCCAAGATTGTGGGTTCCAAATGGGATGTATCCTGGAACAGCATTTACAAGGAGTATAGGGGACAGTTTGGCGGAGACTATTGGTGTCGTTGCTATCCCAGAGGTGTCAACGGTTAAGCTGACACCTAATCATCTTTTTTTTGTTGTTGCAAGTGATGGCATATTTGAATTCCTCTCAAGCCAAACTGTTGTTGATATGGCCTCAGGCTATACCGATCCTGGCGATGCATGTGAAGCTATTGCTGAAGAGTCATATAAACTATGGTTGGAACTTGAGAACCGAACAGATGATATAACAATCATCATTGTTCAGATCAAAGGCCTCACTAGTTTAAGTACGTCTGGAGTTGAATCAGGTGAGATCAATGTTAGTACTGCAATGAGGTCCAGGGCAGTAACTTCTGAGACATCTACTACCACTGGATCTGATGTCTGTCGTTCTGTGAAGAGCAGTTTCTCTGATGTACAATCCTGTCAGCATGTGGCTTCAATGAGGAGTCCAGTCACAGT 1217 0.4462 MGCVHGKCCCGNSSSDDGSRNYREIGFRRKNVIAQRSLKHVAVPSHNFILEYTFLTQRGYYPDSPDKENQDSFCIRTQVQGNPSIHFFGVYDGHGQFGSQCSNFVKDRLVEKLSNDPALVEDPVQAYSSAFLTTNQELHSSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIVAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGIRDPNIQHWGDEESRGGDPPRLWVPNGMYPGTAFTRSIGDSLAETIGVVAIPEVSTVKLTPNHLFFVVASDGIFEFLSSQTVVDMASGYTDPGDACEAIAEESYKLWLELENRTDDITIIIVQIKGLTSLSTSGVESGEINVSTAMRSRAVTSETSTTTGSDVCRSVKSSFSDVQSCQHVASMRSPVTV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi253g00126 406 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Sebi253g00126 406 Pfam Protein phosphatase 2C 74 319 IPR001932 -
Sebi253g00126 406 CDD PP2Cc 67 341 IPR001932 -
Sebi253g00126 406 PANTHER PROTEIN PHOSPHATASE 69 340 IPR015655 GO:0004722|GO:0006470
Sebi253g00126 406 SUPERFAMILY PP2C-like 42 343 IPR036457 -
Sebi253g00126 406 Gene3D - 47 343 IPR036457 -
Sebi253g00126 406 SMART PP2C_4 47 339 IPR001932 -
Sebi253g00126 406 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 46 343 - -
Sebi253g00126 406 ProSiteProfiles PPM-type phosphatase domain profile. 51 341 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi253g00126 Sebi-Chr253 1345102 1347508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi253g00126 1 346 PP2C-type Phosphatase Gene Family AT3G06270 69.914 1.48e-180 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi253g00126 - - gmx:100797866 677.552