Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi253g00064 ATGGAGGGTGACGATCCTCCTTGTCCTTCACCCTTCCCCCCTCTATCCTCTTCTTCTTCTTCGCTTCTCAAGGACATCTCCAACTTCAAAACCCCCATACGCCCCCCCCTCTCTCTCACTGCCAAATCTCCCTCCACCCAATTCTTCACTGCTTCCAAACCAACCACTCTCCAACGCCGCCCCAAGAAATCAGCTACCGCCGCCAGGAAACTCAGAGCTTTCCAACTGGAGCAGTCCCAGTCCTCCAGAAAGGCCCAAATCAAAAAGGAACTGTCCCTCAAATCCCTAGCAAAGTCCCTCACCGTTTGGCTCAACTTCTTGCTCGAATGCCCTGCCTCCTGCGGTTGCGACCTCTCCATCGCCGGAGTCCAGATCTCCGACGCCACTCCGGTGACCAAGGGGAAGCGGAGCACTGGCTCGGGAATCTCAGTCGGAGTTGATTCGACCTGGCGAACTCCCAAGCGCCAGAGGAAAACGTGGTCGAGTGTTGGTAAGCAAAATGCCGCGGTCGAGTTGCCGAATAGCTCGTTTTCGCAGTTGAGGGATTCACTGAAGGATATCTGCAGTTTCGAGGATATGAAGCAGCGAATGATGGTTTATCTGAGCCTCGGAACTTGTGAAGATATCTTCCGAGTGATGACTCGGGTGACAAAGACAATTGATGAAGGAAGGCTAAATTTGAAGGCCCACTGCCCGATAGTTACAGATGTTGGGTTGAAGGACAAGGCCACGAGAATTCTTATGTGTTATAATCCAACTTGGCTGCGAATTGGATTATATATAATATTTGGTGGTGACTCCTTGGTGTTAAATGGGGATATGGATTCTGATCAAGATGTCATATTTTTGAAAATGGTCATTGACAAACTATTTTTCTCACATGAGGGTTTAGCAAAAGCATATGCATATAACAAGATGGTTGAAGGAGTATATAGGTCAGGATACTATGAGAATTTAGGGAATGTAATTTTGAAGAGAATTTTGTTACTTGTGCTTATCCTGGATAAAGCTAAATGTCAAAGTTGCCTCCCGCTTGAGTATGGTATTGACGGATTGGATGGGGGTTCCCCTTTATTATTCAAAGCAGAATCCTGGATTAAATCAAGCAGTCAAGTAATCTATGAATTTCTATCGTCTGATGTAATGCACGGAGAAGGCAATCTTCTAGCACATTTGGTTATTTTCGGTTACAAAGTATCTCATCAACAGGGGCCTCTTGTTGAGTATGATTTCAGGGTCAGAGATTTATTTGTGGATCTCCAAGATGGACTAAAACTGTGTAGAGCTATTCAGCTGTTGCAACACAATTCTTCTATCCTCAAGAAAATTTTAGTTCCCTCAGATACTCCTAAGAAAAATCTGGCGAACTGTGGACTTGCCCTACATTATCTCAGGCAAGCTGGTGTGTCGCTACTTGATGAAGATGACACGATGATTGAGACAGATGATATTGTTAATGGAGATAAAGAACTTATACTTTCCTTGCTCTGGAATATGTTTGTTCAATTGCAGCTACCTCTTTTGGTTGATAAAACAAGTTTAGCTAAGGAAATTTCAAAAATTCAAGGACTTGGCATGGATCTAATAGACTGTGCAAATTCCACTTCTCTGGAATTGCTTTTGAATTGGATTCAGGCTGTTTGTGACAATTATGACTGTCCAATTGACAATTTTCATTCCCTTGTTGATGGCAAAGCAATCTGGTGCTTACTTGATTATTACTTCCAGAAGGAACTTGATGATTCCTGCTCATTGAAGGAAGTTAATAAACAAAGTGGCAAGGCATCGATTTTGTCAGTCAATGAATATTCAGATGCACTGTACAATTTTATCTTGTCCCAGAAGTTGACAACTTTACTGGGGAATTTTCCAGAGGTACTTCAAATAAGTGAGCTACTTCAATACAATGGCGCTTGCAATGATCAAAGTGTGGTGATATTGTTGGTTTTCCTAGCAAGCCAATTGTTTGTCAAGAAAAATATGGATCACTTGAATTTTCACAAGCTTTTGGGTAATCATTGCCAAAGTCCGAACCAAAGACATTTGAGGATGATACAGTGCCTTTCATGTTCTAAATCTGTAAAAAATCCGGATGCTTCAGATGTGCATTCTGATGAAGATTATGCAAGAAAATTCAAGGCCATCCAGGCTTGGTGGCAAGGTATGGCTGAACAAAACCATATCATAAAACCAACTGTCTCTATTATGCAGAGATCCAGAACCACTGAATGCATTACCAACAATAGAAGAGAAAATGCCGCAAGAACAATACAGTCACATATCAGAGGGTTGGTTGTACGGCGCAAGTTTCTGCAGATGGTGAATGCTGTTACCCTCTTGCAAACTGTTCTCAGAGCTTGGCTAAAAGTGAGGAAGGAGTCCGTCTGCATGATATTCACTACCGTTCAAGTCTATGACTTTGCATGTGGTACGCAACTTTATCAGTTCGTCTCAAACATATTTTGGTATTATGTTTCAATACTTATTGGCATGTCATGCTTGTTTGATCACACAGAAATAATGAAGCAATCAGAAACATATAAAAGATATGCCATGCTTTTCGTTCATAGGCATTCTTTTTTGAGCTTGAAGAGGTCAGCACAGCTTATCCAGCAAGCTGTTAGGAGTTGGCTCTATTCGAGGCATCAACATGGATGTAGTATCAGTCCTGTTCTTATGATTACAGATACAGTGACTGCTGCCACAACAGTTCAAAAATTTGTTCGGGGTTGGATGGCACGATCGAGATATATTCGTCAACTAGATCAGAAAAAGAAAGCTTTAAATTTAGCCGCACAGAAAATTGCATTTGAACTTCAAACAAAAGCTGCTGTTAGCATTCAGCTTGCTTGGAAGAAGTTCATATCCTACAAGTCTTCTCAGAGGCAACACTTTGTTGCAACTAAAATTCAATGTAATTTCCGAAGGTGGTTCTTGAGAAAAAGATTTCTAAATCAAATTCAAGCTGTTATAAAAGTTCAATCTTATTTTCGAATGTGGAGATGTGTAAATGCTTTTCAGCACTTAAAAATTCTGTCTAAGGCAGCTATTGTCATTCAATCTTTCCTACGTGGTTGGATTGCACGGAAGGATGCTTATGCACGTAGGAATCATATTGTTGAAATTCAGAGGCATTGCCGTGGTTGGCTTCTGAGACGGGACTTTTTGTTCCAAAGAGACGCTATAGTAAAGATCCAGTGTGTCATTCGAAGCCTGAAATGCCAGAAGGCTCTCTATTGTCTGAAAGATGCTGCATTGGAGATCCAGCGCGTCATTAGAGGGCATTTAACTCGAAATCGGTTCTTAGGTAGTGCTTCCCAGTTACGCGCAGTCATTCCTGTTAGATGCATTTCAAAACCAATGTGCTTCTCTAGTTTCCAACTGGAACTATTCATGTTTTCAGTTGTGAAATTGCAACGCTGGTGGAAGGGTCTCATGTCACATAAACTAATGAATAAGTCGGCCATCATTATTCAGTCTTGTACTCGTGGGTGGATAGCCAGACGAAAGGCCACTGTTCACAAACGCCATGTTGTTGTCATGCAAGAACATGCCGCATTGGAGATCCAACGCTATATTAGGGGGCATTTAACTCGAAATCGGATATTAGGCGGTGCTTCTAAACTACGTGCAGTCATTTCTGCTGGTTGCATTTCAAGACCCGTTGGCTGTTGTAGTTTTCAGCTGGAACTCTTCTTGTTTTCAGTTGTTAAATTGCAACAATGGTGGAAAAGTCTCTTGTTACATAAATTAATGACAAAGTCTGCCATTATTATTCAGTCTCGTGCTCGTGGGTGGATAGCCAGGCGAAAGGCCACTGTTCATAGACATCGTATTATTGTCATCCAATCCCACTGGAAAGGTTACCTTGCACGTAGAGAGTCAAAAGAACAGCTATTGGATTTGCGCTTGAGAGTGCAAGAGTCTGCCAGAAATGTGGATGACAGCAAGCGACTTATAAACAGACTCTTGGCAGCACTGTCAGAGCTACTTAATATGAAGAGTCTAAGTAATATCCTTCATACTTGTTCAACACTGGATATGGCTACAAGACATTCTCAGAGATGTTGTGAAGAACTTGTGGCTGCTGGGGCTGTTGATACCTTGCTGTGGCTTACTCGATCAGTTAGCCGGAGTATACCTGATCAGGAGGTTCTAAAGCATGCTTTGTCAACTCTCAGAAACCTTGCCCGTTATCCTCATTTATTAGAAGTGCTGATCCAAAGTCATGGTTCTGTGCAGACAATTGTCTTGGAATTACTGAGGAATAAGCAAGACGGTTACTTCATTGCTTCTGAACTTCTGAAGAAGATATGTTCAACTCACAAAGGCGTTGAGACGATACTAAAATCCCCTGCCCTACTAAAACGACTGCACAGTCATGTTGAGGAGCTTACTAGGAAGGCCAATTACGAGAAAAGAAATGCTAGGGGTTCTTGTCCGTTTGTTAAAGAGAACAGAGAGAGAAGATTTAAGGAGGCTTCTGAGATTCTGAAGCTGATAAAACGCGCTTGA 4515 0.4204 MEGDDPPCPSPFPPLSSSSSSLLKDISNFKTPIRPPLSLTAKSPSTQFFTASKPTTLQRRPKKSATAARKLRAFQLEQSQSSRKAQIKKELSLKSLAKSLTVWLNFLLECPASCGCDLSIAGVQISDATPVTKGKRSTGSGISVGVDSTWRTPKRQRKTWSSVGKQNAAVELPNSSFSQLRDSLKDICSFEDMKQRMMVYLSLGTCEDIFRVMTRVTKTIDEGRLNLKAHCPIVTDVGLKDKATRILMCYNPTWLRIGLYIIFGGDSLVLNGDMDSDQDVIFLKMVIDKLFFSHEGLAKAYAYNKMVEGVYRSGYYENLGNVILKRILLLVLILDKAKCQSCLPLEYGIDGLDGGSPLLFKAESWIKSSSQVIYEFLSSDVMHGEGNLLAHLVIFGYKVSHQQGPLVEYDFRVRDLFVDLQDGLKLCRAIQLLQHNSSILKKILVPSDTPKKNLANCGLALHYLRQAGVSLLDEDDTMIETDDIVNGDKELILSLLWNMFVQLQLPLLVDKTSLAKEISKIQGLGMDLIDCANSTSLELLLNWIQAVCDNYDCPIDNFHSLVDGKAIWCLLDYYFQKELDDSCSLKEVNKQSGKASILSVNEYSDALYNFILSQKLTTLLGNFPEVLQISELLQYNGACNDQSVVILLVFLASQLFVKKNMDHLNFHKLLGNHCQSPNQRHLRMIQCLSCSKSVKNPDASDVHSDEDYARKFKAIQAWWQGMAEQNHIIKPTVSIMQRSRTTECITNNRRENAARTIQSHIRGLVVRRKFLQMVNAVTLLQTVLRAWLKVRKESVCMIFTTVQVYDFACGTQLYQFVSNIFWYYVSILIGMSCLFDHTEIMKQSETYKRYAMLFVHRHSFLSLKRSAQLIQQAVRSWLYSRHQHGCSISPVLMITDTVTAATTVQKFVRGWMARSRYIRQLDQKKKALNLAAQKIAFELQTKAAVSIQLAWKKFISYKSSQRQHFVATKIQCNFRRWFLRKRFLNQIQAVIKVQSYFRMWRCVNAFQHLKILSKAAIVIQSFLRGWIARKDAYARRNHIVEIQRHCRGWLLRRDFLFQRDAIVKIQCVIRSLKCQKALYCLKDAALEIQRVIRGHLTRNRFLGSASQLRAVIPVRCISKPMCFSSFQLELFMFSVVKLQRWWKGLMSHKLMNKSAIIIQSCTRGWIARRKATVHKRHVVVMQEHAALEIQRYIRGHLTRNRILGGASKLRAVISAGCISRPVGCCSFQLELFLFSVVKLQQWWKSLLLHKLMTKSAIIIQSRARGWIARRKATVHRHRIIVIQSHWKGYLARRESKEQLLDLRLRVQESARNVDDSKRLINRLLAALSELLNMKSLSNILHTCSTLDMATRHSQRCCEELVAAGAVDTLLWLTRSVSRSIPDQEVLKHALSTLRNLARYPHLLEVLIQSHGSVQTIVLELLRNKQDGYFIASELLKKICSTHKGVETILKSPALLKRLHSHVEELTRKANYEKRNARGSCPFVKENRERRFKEASEILKLIKRA 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi253g00064 1504 ProSiteProfiles IQ motif profile. 963 992 IPR000048 GO:0005515
Sebi253g00064 1504 MobiDBLite consensus disorder prediction 1 20 - -
Sebi253g00064 1504 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1364 1411 IPR000225 GO:0005515
Sebi253g00064 1504 SMART iq_5 772 795 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 985 1007 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 1150 1172 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 896 918 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 1011 1033 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 1034 1056 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 1181 1203 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 1080 1102 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 962 984 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 1274 1296 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 1251 1273 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 749 771 IPR000048 GO:0005515
Sebi253g00064 1504 SMART iq_5 1057 1079 IPR000048 GO:0005515
Sebi253g00064 1504 ProSiteProfiles IQ motif profile. 1252 1279 IPR000048 GO:0005515
Sebi253g00064 1504 Gene3D - 1300 1499 IPR011989 -
Sebi253g00064 1504 Pfam IQ calmodulin-binding motif 967 983 IPR000048 GO:0005515
Sebi253g00064 1504 Pfam IQ calmodulin-binding motif 988 1006 IPR000048 GO:0005515
Sebi253g00064 1504 Pfam IQ calmodulin-binding motif 1083 1101 IPR000048 GO:0005515
Sebi253g00064 1504 Pfam IQ calmodulin-binding motif 1039 1055 IPR000048 GO:0005515
Sebi253g00064 1504 Pfam IQ calmodulin-binding motif 1253 1271 IPR000048 GO:0005515
Sebi253g00064 1504 Pfam IQ calmodulin-binding motif 1184 1201 IPR000048 GO:0005515
Sebi253g00064 1504 Pfam IQ calmodulin-binding motif 1277 1294 IPR000048 GO:0005515
Sebi253g00064 1504 Pfam IQ calmodulin-binding motif 752 770 IPR000048 GO:0005515
Sebi253g00064 1504 Pfam IQ calmodulin-binding motif 1153 1170 IPR000048 GO:0005515
Sebi253g00064 1504 Pfam IQ calmodulin-binding motif 900 917 IPR000048 GO:0005515
Sebi253g00064 1504 Pfam IQ calmodulin-binding motif 1014 1031 IPR000048 GO:0005515
Sebi253g00064 1504 ProSiteProfiles IQ motif profile. 750 778 IPR000048 GO:0005515
Sebi253g00064 1504 ProSiteProfiles IQ motif profile. 1035 1064 IPR000048 GO:0005515
Sebi253g00064 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1235 1298 IPR027417 -
Sebi253g00064 1504 Gene3D - 1250 1299 - -
Sebi253g00064 1504 Gene3D - 1059 1111 - -
Sebi253g00064 1504 Gene3D - 1013 1058 - -
Sebi253g00064 1504 Gene3D - 960 1012 - -
Sebi253g00064 1504 Gene3D - 1150 1212 - -
Sebi253g00064 1504 Gene3D - 748 797 - -
Sebi253g00064 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1014 1101 IPR027417 -
Sebi253g00064 1504 ProSiteProfiles IQ motif profile. 1182 1211 IPR000048 GO:0005515
Sebi253g00064 1504 ProSiteProfiles Calponin homology (CH) domain profile. 386 504 IPR001715 GO:0005515
Sebi253g00064 1504 ProSiteProfiles IQ motif profile. 899 926 IPR000048 GO:0005515
Sebi253g00064 1504 ProSiteProfiles IQ motif profile. 1151 1178 IPR000048 GO:0005515
Sebi253g00064 1504 Pfam Calponin homology (CH) domain 412 500 IPR001715 GO:0005515
Sebi253g00064 1504 Gene3D - 532 656 IPR036872 -
Sebi253g00064 1504 ProSiteProfiles IQ motif profile. 1012 1041 IPR000048 GO:0005515
Sebi253g00064 1504 SUPERFAMILY Calponin-homology domain, CH-domain 329 586 IPR036872 -
Sebi253g00064 1504 CDD CH_ASPM_rpt1 388 499 - -
Sebi253g00064 1504 SMART arm_5 1353 1398 IPR000225 GO:0005515
Sebi253g00064 1504 Pfam Armadillo/beta-catenin-like repeat 1354 1398 IPR000225 GO:0005515
Sebi253g00064 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 936 1031 IPR027417 -
Sebi253g00064 1504 SUPERFAMILY ARM repeat 1321 1461 IPR016024 -
Sebi253g00064 1504 ProSiteProfiles IQ motif profile. 1081 1110 IPR000048 GO:0005515
Sebi253g00064 1504 Gene3D - 399 504 IPR036872 -
Sebi253g00064 1504 ProSiteProfiles IQ motif profile. 1275 1303 IPR000048 GO:0005515
Sebi253g00064 1504 PANTHER UNCHARACTERIZED 40 884 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi253g00064 1010 1182 Myosins gene family AT5G43900 26.519 4.01e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi253g00064 K16743 - qsu:112015851 1673.29