Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi253g00029 ATGGAAAGGTCTTTTCCTTTGATTCTATTTCTCCTTGCCATGTCAATGCCTCTTTCATTTGGGATAAAACAAAACCAACTTCATTATAATTACTACAAGTTTTCATGTCCAAATTTGGAAAGTGTAATCAAGAGTGAATTGCTAAGCTTATTCTTGAGAGATGCTACTGCACCAGCAGCATTTCTCAGGCTCATGTTTCATGACTGCCAAGTTCAGGGATGTGATGCCTCCATTTTGTTGGACTCCAATGATAGCTCTGAAATGATTTCTTCAAGAAACTTTGCCATCAGATACAGGGAAATAATCAGCCACATAAAATCAATATTAGAAGAAGAATGTCCAGGACAGGTGTCATGTGCAGATATCATTGTATTAGCTGCTAAGGAAGCAGTGTCATTCTCTGGAGGACCCCTTATTCAGATACCACTTGGAAGAAAAGATTCCAGAACTTGCAGTTTCAAGGAGGCTGATGCTAAGCTTCCTTCACCCACAATAACCGTTGATGAATTTATATCCATTTTCATGTCTAAAGGAATGAGCATTGAAGAATCCGTTTCCATTCTAGGGGCACATACACTAGGTGTTGGACACTGCTTAAACATTGTTGGCAGATTGTATGATCAAAGGATAGGGGATGAGATGGATTTGAATTTTGAAGCCTCACTAAGACTAGCATGCCCAACTGAGATTCCTCTAACAAACCTCACATTTGTGCCTAATGACATGACCCCTATAATATTTGACAACCACTATTACCGAGACATTATAATGGGGAGAGGTTTGTTTGGTATTGACTCAAACATTTCTAGAGATCCCCGAACTGCACCTTTTGTCATGAGGTTTGCTTTGGATCAGAATTACTTCTTCGAGGCTTTCTCATCTGCATTTCTTAAGCTTTCTACTACCAATGTTCTCACAAATGAGCAGGGTGATGTTCGAAGGCAATGCAACCAGGTAAACTAA 963 0.3956 MERSFPLILFLLAMSMPLSFGIKQNQLHYNYYKFSCPNLESVIKSELLSLFLRDATAPAAFLRLMFHDCQVQGCDASILLDSNDSSEMISSRNFAIRYREIISHIKSILEEECPGQVSCADIIVLAAKEAVSFSGGPLIQIPLGRKDSRTCSFKEADAKLPSPTITVDEFISIFMSKGMSIEESVSILGAHTLGVGHCLNIVGRLYDQRIGDEMDLNFEASLRLACPTEIPLTNLTFVPNDMTPIIFDNHYYRDIIMGRGLFGIDSNISRDPRTAPFVMRFALDQNYFFEAFSSAFLKLSTTNVLTNEQGDVRRQCNQVN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi253g00029 320 SUPERFAMILY Heme-dependent peroxidases 26 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 CDD secretory_peroxidase 26 319 IPR033905 GO:0004601|GO:0042744
Sebi253g00029 320 Gene3D Peroxidase, domain 2 161 299 - -
Sebi253g00029 320 FunFam Peroxidase 161 299 - -
Sebi253g00029 320 Pfam Peroxidase 46 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 ProSiteProfiles Plant heme peroxidase family profile. 26 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 PANTHER - 9 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi253g00029 320 Gene3D - 30 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi253g00029 Sebi-Chr253 322755 324818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi253g00029 73 320 Peroxidase AT3G17070 52.344 1.06e-86 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi253g00029 K00430 - gmx:100806951 547.354