Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi253g00027 ATGTCAGAAGTGAAGGCCATTGATTGCCTGGCTAATTGTGAGAGGGAAGAAAACCGAAATCTGTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCCCCATCTGATAAATTTGAAGATCTTCTGCCCCGCCATTGTGATGAGTTTATTTGCTCCTTGCCATTCCAAGAGTATACTGATCCTCGGGCTGGAATTCTTAATCTCGCTGTAAAGTTGCCAGCCCATGTCCTTAAACCTGATATGGGTCCAAAAACATATATTGCTTATGGGATTAAAGAAGAACTTGGTAGAGGAGACTCTGTAACAAAGCTTCACTGTGACATGTCTGATGCGGTGAATATTTTGACCCATACAGCTGAGGTGATGTTAACTGATGAGCAGCACTCGATTATTCCAAAGTTGAAAGAAGCGCACAAGGCACAAGATGAGAGAGAACTCTGCCCTCAAGAGAGGGTTGCTGAATGGTTGAATGGTCGACCTTGCAAAGACAACATAGAAAAGATAGAGAATAAGGAAGTCTTAGAACCCAATGATATGGAGAAGCGCCCTATTGAAATTAATGGAAAGATCTTTCGAAATAGTGTGTCCCAAGGGGCTACTTTTCCTGCTATTTCTACAGAAAACGAATCAATGGAAACAGAACCCTGGACTTTTGAGCAGAAACTTGGGGAGGCAGTAGTTATTCCTGCCGGATGCCCACATCAAGTCAGAAATCTCAAGTCATGCACAAAAGTTGCTGTAGACTTCGTGTCCCCAGAAAATGTCCATGAGTGTCTGCGTTTAACTAATGAGTTCCGTCAGCTCCCCAAGAACCACAAGGCTAGAGAAGATAAACTAGAGATAAAGAAGATGATAGTTTATGCCGTCGATCAAGCTGTCAAAGACTTAAAAGCTTTGTTTGAGTGCTCTTGA 909 0.4301 MSEVKAIDCLANCEREENRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFICSLPFQEYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVMLTDEQHSIIPKLKEAHKAQDERELCPQERVAEWLNGRPCKDNIEKIENKEVLEPNDMEKRPIEINGKIFRNSVSQGATFPAISTENESMETEPWTFEQKLGEAVVIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTNEFRQLPKNHKAREDKLEIKKMIVYAVDQAVKDLKALFECS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi253g00027 302 ProSiteProfiles JmjC domain profile. 60 265 IPR003347 -
Sebi253g00027 302 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 2 163 IPR045109 GO:0032454|GO:0033169
Sebi253g00027 302 Pfam JmjC domain, hydroxylase 210 248 IPR003347 -
Sebi253g00027 302 SMART cupin_9 41 265 IPR003347 -
Sebi253g00027 302 Gene3D Cupin 1 274 - -
Sebi253g00027 302 SUPERFAMILY Clavaminate synthase-like 21 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi253g00027 Sebi-Chr253 307258 309787 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sebi253g00027 JmjC 8.2e-10 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi253g00027 K15601 - thj:104809481 379.022